Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.07■□□□□ 0.32
SMARCE1Q969G3 AC241585.1-201ENST00000433527 519 ntBASIC17.07■□□□□ 0.32
SMARCE1Q969G3 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SMARCE1Q969G3 IGHV3-42-201ENST00000520410 361 ntBASIC17.07■□□□□ 0.32
SMARCE1Q969G3 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.07■□□□□ 0.32
SMARCE1Q969G3 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SMARCE1Q969G3 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SMARCE1Q969G3 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMARCE1Q969G3 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SMARCE1Q969G3 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17.07■□□□□ 0.32
SMARCE1Q969G3 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SMARCE1Q969G3 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMARCE1Q969G3 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMARCE1Q969G3 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SMARCE1Q969G3 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMARCE1Q969G3 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMARCE1Q969G3 BTBD7P1-201ENST00000447253 1453 ntBASIC17.06■□□□□ 0.32
SMARCE1Q969G3 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMARCE1Q969G3 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC17.06■□□□□ 0.32
SMARCE1Q969G3 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
SMARCE1Q969G3 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMARCE1Q969G3 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
SMARCE1Q969G3 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMARCE1Q969G3 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.06■□□□□ 0.32
SMARCE1Q969G3 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC17.06■□□□□ 0.32
SMARCE1Q969G3 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMARCE1Q969G3 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMARCE1Q969G3 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMARCE1Q969G3 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMARCE1Q969G3 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.06■□□□□ 0.32
SMARCE1Q969G3 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.06■□□□□ 0.32
SMARCE1Q969G3 TSSK5P-201ENST00000423978 907 ntBASIC17.06■□□□□ 0.32
SMARCE1Q969G3 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.06■□□□□ 0.32
SMARCE1Q969G3 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.06■□□□□ 0.32
SMARCE1Q969G3 AC009477.1-201ENST00000452936 217 ntBASIC17.06■□□□□ 0.32
SMARCE1Q969G3 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMARCE1Q969G3 GAPDHP40-201ENST00000505218 1006 ntBASIC17.06■□□□□ 0.32
SMARCE1Q969G3 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.06■□□□□ 0.32
SMARCE1Q969G3 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.06■□□□□ 0.32
SMARCE1Q969G3 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.06■□□□□ 0.32
SMARCE1Q969G3 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.06■□□□□ 0.32
SMARCE1Q969G3 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.06■□□□□ 0.32
SMARCE1Q969G3 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMARCE1Q969G3 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMARCE1Q969G3 AC126335.2-201ENST00000623362 4637 ntBASIC17.06■□□□□ 0.32
SMARCE1Q969G3 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMARCE1Q969G3 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC17.06■□□□□ 0.32
SMARCE1Q969G3 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMARCE1Q969G3 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMARCE1Q969G3 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.06■□□□□ 0.32
SMARCE1Q969G3 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
SMARCE1Q969G3 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMARCE1Q969G3 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMARCE1Q969G3 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.06■□□□□ 0.32
SMARCE1Q969G3 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMARCE1Q969G3 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMARCE1Q969G3 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMARCE1Q969G3 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SMARCE1Q969G3 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SMARCE1Q969G3 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SMARCE1Q969G3 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SMARCE1Q969G3 CLK3P2-201ENST00000427566 1453 ntBASIC17.05■□□□□ 0.32
SMARCE1Q969G3 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMARCE1Q969G3 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMARCE1Q969G3 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SMARCE1Q969G3 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SMARCE1Q969G3 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMARCE1Q969G3 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMARCE1Q969G3 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMARCE1Q969G3 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMARCE1Q969G3 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.05■□□□□ 0.32
SMARCE1Q969G3 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMARCE1Q969G3 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SMARCE1Q969G3 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SMARCE1Q969G3 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMARCE1Q969G3 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMARCE1Q969G3 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
SMARCE1Q969G3 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC17.05■□□□□ 0.32
SMARCE1Q969G3 AP001267.2-201ENST00000532619 2086 ntBASIC17.05■□□□□ 0.32
SMARCE1Q969G3 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMARCE1Q969G3 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMARCE1Q969G3 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMARCE1Q969G3 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SMARCE1Q969G3 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMARCE1Q969G3 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.05■□□□□ 0.32
SMARCE1Q969G3 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.05■□□□□ 0.32
SMARCE1Q969G3 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMARCE1Q969G3 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.05■□□□□ 0.32
SMARCE1Q969G3 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SMARCE1Q969G3 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.05■□□□□ 0.32
SMARCE1Q969G3 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.05■□□□□ 0.32
SMARCE1Q969G3 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SMARCE1Q969G3 AL391069.4-201ENST00000609583 481 ntBASIC17.05■□□□□ 0.32
SMARCE1Q969G3 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.05■□□□□ 0.32
SMARCE1Q969G3 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMARCE1Q969G3 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.05■□□□□ 0.32
SMARCE1Q969G3 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SMARCE1Q969G3 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMARCE1Q969G3 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC17.05■□□□□ 0.32
SMARCE1Q969G3 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms