Protein–RNA interactions for Protein: Q8WWF1

C1orf54, Uncharacterized protein C1orf54, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf54Q8WWF1 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
C1orf54Q8WWF1 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
C1orf54Q8WWF1 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
C1orf54Q8WWF1 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
C1orf54Q8WWF1 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
C1orf54Q8WWF1 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
C1orf54Q8WWF1 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.72■□□□□ 0.11
C1orf54Q8WWF1 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
C1orf54Q8WWF1 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
C1orf54Q8WWF1 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
C1orf54Q8WWF1 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
C1orf54Q8WWF1 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.72■□□□□ 0.11
C1orf54Q8WWF1 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.72■□□□□ 0.11
C1orf54Q8WWF1 KRT18P13-201ENST00000400056 1290 ntBASIC15.72■□□□□ 0.11
C1orf54Q8WWF1 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.72■□□□□ 0.11
C1orf54Q8WWF1 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.72■□□□□ 0.11
C1orf54Q8WWF1 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
C1orf54Q8WWF1 AC009407.1-201ENST00000568958 598 ntBASIC15.72■□□□□ 0.11
C1orf54Q8WWF1 AL354702.1-201ENST00000442006 1960 ntBASIC15.72■□□□□ 0.11
C1orf54Q8WWF1 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
C1orf54Q8WWF1 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
C1orf54Q8WWF1 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
C1orf54Q8WWF1 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
C1orf54Q8WWF1 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
C1orf54Q8WWF1 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
C1orf54Q8WWF1 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
C1orf54Q8WWF1 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C1orf54Q8WWF1 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C1orf54Q8WWF1 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C1orf54Q8WWF1 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
C1orf54Q8WWF1 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.71■□□□□ 0.11
C1orf54Q8WWF1 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
C1orf54Q8WWF1 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
C1orf54Q8WWF1 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C1orf54Q8WWF1 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C1orf54Q8WWF1 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.71■□□□□ 0.11
C1orf54Q8WWF1 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.71■□□□□ 0.11
C1orf54Q8WWF1 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.71■□□□□ 0.11
C1orf54Q8WWF1 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
C1orf54Q8WWF1 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
C1orf54Q8WWF1 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.71■□□□□ 0.11
C1orf54Q8WWF1 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C1orf54Q8WWF1 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
C1orf54Q8WWF1 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
C1orf54Q8WWF1 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.71■□□□□ 0.11
C1orf54Q8WWF1 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
C1orf54Q8WWF1 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
C1orf54Q8WWF1 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C1orf54Q8WWF1 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C1orf54Q8WWF1 MIR943-201ENST00000401286 94 ntBASIC15.71■□□□□ 0.11
C1orf54Q8WWF1 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.71■□□□□ 0.11
C1orf54Q8WWF1 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.71■□□□□ 0.11
C1orf54Q8WWF1 AC009477.1-201ENST00000452936 217 ntBASIC15.71■□□□□ 0.11
C1orf54Q8WWF1 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.71■□□□□ 0.11
C1orf54Q8WWF1 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.71■□□□□ 0.11
C1orf54Q8WWF1 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.71■□□□□ 0.11
C1orf54Q8WWF1 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.71■□□□□ 0.11
C1orf54Q8WWF1 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.71■□□□□ 0.11
C1orf54Q8WWF1 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
C1orf54Q8WWF1 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.71■□□□□ 0.11
C1orf54Q8WWF1 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.71■□□□□ 0.11
C1orf54Q8WWF1 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
C1orf54Q8WWF1 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.71■□□□□ 0.11
C1orf54Q8WWF1 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C1orf54Q8WWF1 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
C1orf54Q8WWF1 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
C1orf54Q8WWF1 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C1orf54Q8WWF1 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
C1orf54Q8WWF1 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
C1orf54Q8WWF1 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.71■□□□□ 0.1
C1orf54Q8WWF1 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
C1orf54Q8WWF1 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
C1orf54Q8WWF1 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
C1orf54Q8WWF1 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
C1orf54Q8WWF1 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
C1orf54Q8WWF1 AC093525.8-201ENST00000624099 1342 ntBASIC15.7■□□□□ 0.1
C1orf54Q8WWF1 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.7■□□□□ 0.1
C1orf54Q8WWF1 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.7■□□□□ 0.1
C1orf54Q8WWF1 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.7■□□□□ 0.1
C1orf54Q8WWF1 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
C1orf54Q8WWF1 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
C1orf54Q8WWF1 DRD5P1-201ENST00000456605 1438 ntBASIC15.7■□□□□ 0.1
C1orf54Q8WWF1 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.7■□□□□ 0.1
C1orf54Q8WWF1 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.7■□□□□ 0.1
C1orf54Q8WWF1 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C1orf54Q8WWF1 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.7■□□□□ 0.1
C1orf54Q8WWF1 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
C1orf54Q8WWF1 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C1orf54Q8WWF1 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
C1orf54Q8WWF1 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.7■□□□□ 0.1
C1orf54Q8WWF1 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
C1orf54Q8WWF1 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
C1orf54Q8WWF1 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
C1orf54Q8WWF1 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
C1orf54Q8WWF1 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.7■□□□□ 0.1
C1orf54Q8WWF1 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
C1orf54Q8WWF1 FAM86GP-201ENST00000448322 971 ntBASIC15.7■□□□□ 0.1
C1orf54Q8WWF1 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.7■□□□□ 0.1
C1orf54Q8WWF1 IGHV3-42-201ENST00000520410 361 ntBASIC15.7■□□□□ 0.1
C1orf54Q8WWF1 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms