Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 AL627231.1-201ENST00000394467 1125 ntBASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 RN7SL181P-201ENST00000462921 277 ntBASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 AP003419.4-201ENST00000616071 517 ntBASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 AC133540.1-201ENST00000620845 1019 ntBASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 AC051619.9-201ENST00000623237 597 ntBASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 AC112693.3-201ENST00000624819 1983 ntBASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 FAM90A2P-201ENST00000511144 1395 ntBASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 FAM90A25P-201ENST00000528404 1395 ntBASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 DOC2GP-204ENST00000639052 2548 ntBASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.98■□□□□ 0.15
NPAS4Q8IUM7 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 MROH4P-201ENST00000431302 1578 ntBASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 STK26-204ENST00000481105 1835 ntTSL 2 BASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 NCR3-202ENST00000376071 541 ntTSL 5 BASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 RN7SL67P-201ENST00000492147 296 ntBASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 MBP-227ENST00000526111 581 ntTSL 4 BASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 AC011491.1-203ENST00000637688 543 ntBASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 AC126365.1-201ENST00000578585 1514 ntBASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS4Q8IUM7 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 FRMPD2B-201ENST00000431305 1347 ntBASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 REXO1L2P-201ENST00000425429 2069 ntBASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS4Q8IUM7 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms