Protein–RNA interactions for Protein: Q86T23

CROCCP2, Putative ciliary rootlet coiled-coil protein-like 1 protein, humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2Q86T23 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP2Q86T23 KRT8P12-202ENST00000472924 1397 ntBASIC15.36■□□□□ 0.05
CROCCP2Q86T23 RET-205ENST00000615310 4337 ntTSL 5 BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 AC105206.1-202ENST00000314927 2368 ntBASIC15.36■□□□□ 0.05
CROCCP2Q86T23 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 USP3-204ENST00000540797 5474 ntTSL 2 BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.36■□□□□ 0.05
CROCCP2Q86T23 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 SPCS2P4-201ENST00000436160 681 ntBASIC15.36■□□□□ 0.05
CROCCP2Q86T23 SPDYE11-202ENST00000450699 704 ntBASIC15.36■□□□□ 0.05
CROCCP2Q86T23 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 KRT18P35-201ENST00000510488 1269 ntBASIC15.36■□□□□ 0.05
CROCCP2Q86T23 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 AC243562.1-201ENST00000560672 389 ntBASIC15.36■□□□□ 0.05
CROCCP2Q86T23 SPDYE9P-201ENST00000570642 692 ntBASIC15.36■□□□□ 0.05
CROCCP2Q86T23 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 SPDYE10P-202ENST00000612005 668 ntBASIC15.36■□□□□ 0.05
CROCCP2Q86T23 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 SPDYE8P-202ENST00000612377 668 ntBASIC15.36■□□□□ 0.05
CROCCP2Q86T23 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP2Q86T23 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.35■□□□□ 0.05
CROCCP2Q86T23 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CROCCP2Q86T23 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CROCCP2Q86T23 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CROCCP2Q86T23 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
CROCCP2Q86T23 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CROCCP2Q86T23 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
CROCCP2Q86T23 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CROCCP2Q86T23 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
CROCCP2Q86T23 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CROCCP2Q86T23 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.35■□□□□ 0.05
CROCCP2Q86T23 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.35■□□□□ 0.05
CROCCP2Q86T23 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CROCCP2Q86T23 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CROCCP2Q86T23 AC107918.4-201ENST00000641966 3141 ntBASIC15.35■□□□□ 0.05
CROCCP2Q86T23 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CROCCP2Q86T23 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
CROCCP2Q86T23 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CROCCP2Q86T23 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CROCCP2Q86T23 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CROCCP2Q86T23 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CROCCP2Q86T23 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CROCCP2Q86T23 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC15.35■□□□□ 0.05
CROCCP2Q86T23 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC15.35■□□□□ 0.05
CROCCP2Q86T23 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CROCCP2Q86T23 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CROCCP2Q86T23 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CROCCP2Q86T23 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.35■□□□□ 0.05
CROCCP2Q86T23 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CROCCP2Q86T23 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CROCCP2Q86T23 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.35■□□□□ 0.05
CROCCP2Q86T23 EMBP1-201ENST00000458200 901 ntBASIC15.35■□□□□ 0.05
CROCCP2Q86T23 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms