Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC10.26□□□□□ -0.77
CXCL5P42830 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC10.26□□□□□ -0.77
CXCL5P42830 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC10.26□□□□□ -0.77
CXCL5P42830 MED15P5-201ENST00000423150 992 ntBASIC10.26□□□□□ -0.77
CXCL5P42830 ADH5P3-201ENST00000433842 1137 ntBASIC10.26□□□□□ -0.77
CXCL5P42830 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC10.26□□□□□ -0.77
CXCL5P42830 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC10.26□□□□□ -0.77
CXCL5P42830 PP7080-204ENST00000510714 601 ntTSL 3 BASIC10.26□□□□□ -0.77
CXCL5P42830 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC10.26□□□□□ -0.77
CXCL5P42830 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CXCL5P42830 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC10.26□□□□□ -0.77
CXCL5P42830 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
CXCL5P42830 SSH2-211ENST00000590153 570 ntTSL 4 BASIC10.26□□□□□ -0.77
CXCL5P42830 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC10.26□□□□□ -0.77
CXCL5P42830 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
CXCL5P42830 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC10.26□□□□□ -0.77
CXCL5P42830 FAM197Y3-203ENST00000618346 717 ntBASIC10.26□□□□□ -0.77
CXCL5P42830 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC10.26□□□□□ -0.77
CXCL5P42830 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
CXCL5P42830 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
CXCL5P42830 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
CXCL5P42830 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CXCL5P42830 AC113367.3-201ENST00000508316 1912 ntBASIC10.26□□□□□ -0.77
CXCL5P42830 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CXCL5P42830 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
CXCL5P42830 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
CXCL5P42830 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CXCL5P42830 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC10.26□□□□□ -0.77
CXCL5P42830 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
CXCL5P42830 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CXCL5P42830 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC10.26□□□□□ -0.77
CXCL5P42830 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
CXCL5P42830 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CXCL5P42830 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
CXCL5P42830 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CXCL5P42830 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
CXCL5P42830 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC10.26□□□□□ -0.77
CXCL5P42830 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CXCL5P42830 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CXCL5P42830 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CXCL5P42830 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CXCL5P42830 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CXCL5P42830 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CXCL5P42830 FUK-202ENST00000378912 3925 ntTSL 2 BASIC10.26□□□□□ -0.77
CXCL5P42830 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
CXCL5P42830 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CXCL5P42830 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC10.25□□□□□ -0.77
CXCL5P42830 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
CXCL5P42830 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC10.25□□□□□ -0.77
CXCL5P42830 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC10.25□□□□□ -0.77
CXCL5P42830 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CXCL5P42830 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CXCL5P42830 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
CXCL5P42830 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC10.25□□□□□ -0.77
CXCL5P42830 TK1-203ENST00000588734 1681 ntTSL 2 BASIC10.25□□□□□ -0.77
CXCL5P42830 TKT-201ENST00000296289 1931 ntTSL 5 BASIC10.25□□□□□ -0.77
CXCL5P42830 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
CXCL5P42830 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CXCL5P42830 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CXCL5P42830 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CXCL5P42830 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC10.25□□□□□ -0.77
CXCL5P42830 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CXCL5P42830 AC138969.3-201ENST00000546612 1459 ntBASIC10.25□□□□□ -0.77
CXCL5P42830 AC138932.2-201ENST00000548268 1459 ntBASIC10.25□□□□□ -0.77
CXCL5P42830 AC126755.4-201ENST00000549796 1459 ntBASIC10.25□□□□□ -0.77
CXCL5P42830 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CXCL5P42830 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CXCL5P42830 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC10.25□□□□□ -0.77
CXCL5P42830 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC10.25□□□□□ -0.77
CXCL5P42830 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CXCL5P42830 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC10.25□□□□□ -0.77
CXCL5P42830 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CXCL5P42830 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CXCL5P42830 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
CXCL5P42830 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC10.25□□□□□ -0.77
CXCL5P42830 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CXCL5P42830 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CXCL5P42830 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CXCL5P42830 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
CXCL5P42830 RBM39-205ENST00000397370 612 ntTSL 2 BASIC10.25□□□□□ -0.77
CXCL5P42830 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC10.25□□□□□ -0.77
CXCL5P42830 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
CXCL5P42830 USP40-206ENST00000443711 628 ntTSL 2 BASIC10.25□□□□□ -0.77
CXCL5P42830 KRT18P3-201ENST00000451602 1288 ntBASIC10.25□□□□□ -0.77
CXCL5P42830 TIMM8BP1-201ENST00000452384 211 ntBASIC10.25□□□□□ -0.77
CXCL5P42830 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC10.25□□□□□ -0.77
CXCL5P42830 SERBP1P3-201ENST00000459980 809 ntBASIC10.25□□□□□ -0.77
CXCL5P42830 RPL13AP23-201ENST00000480739 586 ntBASIC10.25□□□□□ -0.77
CXCL5P42830 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC10.25□□□□□ -0.77
CXCL5P42830 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CXCL5P42830 SLC25A39P2-201ENST00000537614 270 ntBASIC10.25□□□□□ -0.77
CXCL5P42830 TSFM-210ENST00000550559 897 ntTSL 5 BASIC10.25□□□□□ -0.77
CXCL5P42830 LINC01225-203ENST00000563550 1244 ntBASIC10.25□□□□□ -0.77
CXCL5P42830 AC105021.1-202ENST00000570572 669 ntBASIC10.25□□□□□ -0.77
CXCL5P42830 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CXCL5P42830 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC10.25□□□□□ -0.77
CXCL5P42830 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC10.25□□□□□ -0.77
CXCL5P42830 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CXCL5P42830 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
CXCL5P42830 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms