Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
SNCAP37840 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.51□□□□□ -0.41
SNCAP37840 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SNCAP37840 STRCP1-201ENST00000509801 5328 ntBASIC12.51□□□□□ -0.41
SNCAP37840 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.51□□□□□ -0.41
SNCAP37840 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SNCAP37840 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
SNCAP37840 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.5□□□□□ -0.41
SNCAP37840 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC12.5□□□□□ -0.41
SNCAP37840 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.5□□□□□ -0.41
SNCAP37840 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SNCAP37840 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SNCAP37840 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SNCAP37840 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SNCAP37840 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.5□□□□□ -0.41
SNCAP37840 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SNCAP37840 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SNCAP37840 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SNCAP37840 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SNCAP37840 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SNCAP37840 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SNCAP37840 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
SNCAP37840 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
SNCAP37840 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.5□□□□□ -0.41
SNCAP37840 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SNCAP37840 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SNCAP37840 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SNCAP37840 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
SNCAP37840 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SNCAP37840 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC12.5□□□□□ -0.41
SNCAP37840 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC12.5□□□□□ -0.41
SNCAP37840 SLC25A1P1-201ENST00000528351 927 ntBASIC12.5□□□□□ -0.41
SNCAP37840 RARRES2P9-201ENST00000565168 469 ntBASIC12.5□□□□□ -0.41
SNCAP37840 COQ9-214ENST00000567933 882 ntTSL 3 BASIC12.5□□□□□ -0.41
SNCAP37840 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC12.5□□□□□ -0.41
SNCAP37840 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC12.5□□□□□ -0.41
SNCAP37840 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SNCAP37840 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC12.5□□□□□ -0.41
SNCAP37840 C20orf181-201ENST00000623918 480 ntBASIC12.5□□□□□ -0.41
SNCAP37840 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SNCAP37840 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SNCAP37840 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SNCAP37840 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SNCAP37840 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SNCAP37840 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SNCAP37840 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.5□□□□□ -0.41
SNCAP37840 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC12.5□□□□□ -0.41
SNCAP37840 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SNCAP37840 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SNCAP37840 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SNCAP37840 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.5□□□□□ -0.41
SNCAP37840 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SNCAP37840 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC12.5□□□□□ -0.41
SNCAP37840 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.5□□□□□ -0.41
SNCAP37840 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SNCAP37840 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SNCAP37840 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.5□□□□□ -0.41
SNCAP37840 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC12.5□□□□□ -0.41
SNCAP37840 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.5□□□□□ -0.41
SNCAP37840 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SNCAP37840 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
SNCAP37840 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
SNCAP37840 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SNCAP37840 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.5□□□□□ -0.41
SNCAP37840 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
SNCAP37840 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.49□□□□□ -0.41
SNCAP37840 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SNCAP37840 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
SNCAP37840 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SNCAP37840 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SNCAP37840 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SNCAP37840 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
SNCAP37840 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SNCAP37840 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SNCAP37840 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SNCAP37840 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SNCAP37840 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC12.49□□□□□ -0.41
SNCAP37840 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.49□□□□□ -0.41
SNCAP37840 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SNCAP37840 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SNCAP37840 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SNCAP37840 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SNCAP37840 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC12.49□□□□□ -0.41
SNCAP37840 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
SNCAP37840 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SNCAP37840 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SNCAP37840 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SNCAP37840 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SNCAP37840 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SNCAP37840 MCCD1P2-201ENST00000423228 335 ntBASIC12.49□□□□□ -0.41
SNCAP37840 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SNCAP37840 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC12.49□□□□□ -0.41
SNCAP37840 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC12.49□□□□□ -0.41
SNCAP37840 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC12.49□□□□□ -0.41
SNCAP37840 SLC25A39P2-201ENST00000537614 270 ntBASIC12.49□□□□□ -0.41
SNCAP37840 SUOX-214ENST00000551841 906 ntTSL 3 BASIC12.49□□□□□ -0.41
SNCAP37840 LINC01225-203ENST00000563550 1244 ntBASIC12.49□□□□□ -0.41
SNCAP37840 SSH2-211ENST00000590153 570 ntTSL 4 BASIC12.49□□□□□ -0.41
SNCAP37840 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
SNCAP37840 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms