Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.64□□□□□ -0.23
HLA-DQA2P01906 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 AC097493.3-201ENST00000509725 367 ntBASIC13.64□□□□□ -0.23
HLA-DQA2P01906 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 AL158211.3-201ENST00000607385 239 ntBASIC13.64□□□□□ -0.23
HLA-DQA2P01906 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.64□□□□□ -0.23
HLA-DQA2P01906 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 AL645728.2-202ENST00000641679 227 ntBASIC13.64□□□□□ -0.23
HLA-DQA2P01906 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DQA2P01906 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA2P01906 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.63□□□□□ -0.23
HLA-DQA2P01906 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.63□□□□□ -0.23
HLA-DQA2P01906 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
HLA-DQA2P01906 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA2P01906 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA2P01906 REXO1L1P-201ENST00000379010 6598 ntBASIC13.63□□□□□ -0.23
HLA-DQA2P01906 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.63□□□□□ -0.23
HLA-DQA2P01906 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
HLA-DQA2P01906 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.63□□□□□ -0.23
HLA-DQA2P01906 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
HLA-DQA2P01906 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA2P01906 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
HLA-DQA2P01906 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA2P01906 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA2P01906 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA2P01906 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA2P01906 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA2P01906 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA2P01906 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.63□□□□□ -0.23
HLA-DQA2P01906 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA2P01906 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.63□□□□□ -0.23
HLA-DQA2P01906 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.63□□□□□ -0.23
HLA-DQA2P01906 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.63□□□□□ -0.23
HLA-DQA2P01906 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.63□□□□□ -0.23
HLA-DQA2P01906 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.63□□□□□ -0.23
HLA-DQA2P01906 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.63□□□□□ -0.23
HLA-DQA2P01906 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.63□□□□□ -0.23
HLA-DQA2P01906 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.63□□□□□ -0.23
HLA-DQA2P01906 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.63□□□□□ -0.23
HLA-DQA2P01906 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.63□□□□□ -0.23
HLA-DQA2P01906 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA2P01906 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA2P01906 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA2P01906 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA2P01906 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA2P01906 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
HLA-DQA2P01906 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA2P01906 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA2P01906 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA2P01906 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA2P01906 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA2P01906 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms