Protein–RNA interactions for Protein: O95801

TTC4, Tetratricopeptide repeat protein 4, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC4O95801 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.54■□□□□ 0.08
TTC4O95801 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.54■□□□□ 0.08
TTC4O95801 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.54■□□□□ 0.08
TTC4O95801 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.54■□□□□ 0.08
TTC4O95801 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TTC4O95801 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.54■□□□□ 0.08
TTC4O95801 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TTC4O95801 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TTC4O95801 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
TTC4O95801 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.54■□□□□ 0.08
TTC4O95801 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TTC4O95801 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TTC4O95801 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.54■□□□□ 0.08
TTC4O95801 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TTC4O95801 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TTC4O95801 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TTC4O95801 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TTC4O95801 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TTC4O95801 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TTC4O95801 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TTC4O95801 AC011474.4-201ENST00000623523 2076 ntBASIC15.53■□□□□ 0.08
TTC4O95801 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TTC4O95801 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TTC4O95801 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
TTC4O95801 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TTC4O95801 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TTC4O95801 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TTC4O95801 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.53■□□□□ 0.08
TTC4O95801 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
TTC4O95801 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.53■□□□□ 0.08
TTC4O95801 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.53■□□□□ 0.08
TTC4O95801 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TTC4O95801 AC087499.5-201ENST00000452760 1342 ntBASIC15.53■□□□□ 0.08
TTC4O95801 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TTC4O95801 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TTC4O95801 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TTC4O95801 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TTC4O95801 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TTC4O95801 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TTC4O95801 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TTC4O95801 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TTC4O95801 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.53■□□□□ 0.08
TTC4O95801 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.53■□□□□ 0.08
TTC4O95801 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.53■□□□□ 0.08
TTC4O95801 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.53■□□□□ 0.08
TTC4O95801 TSEN15P1-201ENST00000423257 515 ntBASIC15.53■□□□□ 0.08
TTC4O95801 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.53■□□□□ 0.08
TTC4O95801 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.53■□□□□ 0.08
TTC4O95801 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.53■□□□□ 0.08
TTC4O95801 AC069120.2-201ENST00000524091 540 ntBASIC15.53■□□□□ 0.08
TTC4O95801 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TTC4O95801 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TTC4O95801 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.53■□□□□ 0.08
TTC4O95801 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TTC4O95801 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.53■□□□□ 0.08
TTC4O95801 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.53■□□□□ 0.08
TTC4O95801 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TTC4O95801 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.53■□□□□ 0.08
TTC4O95801 Z92544.3-201ENST00000624747 417 ntBASIC15.53■□□□□ 0.08
TTC4O95801 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.53■□□□□ 0.08
TTC4O95801 AL109936.8-201ENST00000641772 604 ntBASIC15.53■□□□□ 0.08
TTC4O95801 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TTC4O95801 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TTC4O95801 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TTC4O95801 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TTC4O95801 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TTC4O95801 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.53■□□□□ 0.08
TTC4O95801 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TTC4O95801 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TTC4O95801 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.53■□□□□ 0.08
TTC4O95801 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TTC4O95801 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TTC4O95801 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TTC4O95801 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
TTC4O95801 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.53■□□□□ 0.08
TTC4O95801 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TTC4O95801 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TTC4O95801 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.53■□□□□ 0.08
TTC4O95801 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TTC4O95801 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TTC4O95801 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TTC4O95801 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TTC4O95801 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
TTC4O95801 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TTC4O95801 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TTC4O95801 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TTC4O95801 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TTC4O95801 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
TTC4O95801 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TTC4O95801 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TTC4O95801 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TTC4O95801 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TTC4O95801 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TTC4O95801 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TTC4O95801 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TTC4O95801 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.52■□□□□ 0.08
TTC4O95801 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.52■□□□□ 0.08
TTC4O95801 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.52■□□□□ 0.08
TTC4O95801 KLF2P3-201ENST00000451977 1087 ntBASIC15.52■□□□□ 0.08
TTC4O95801 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms