Protein–RNA interactions for Protein: Q9NR81

ARHGEF3, Rho guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3Q9NR81 AC006435.4-201ENST00000625037 234 ntBASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 AL356737.1-201ENST00000634391 234 ntBASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 AC005840.4-201ENST00000541242 2494 ntBASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 AC063926.3-201ENST00000624734 5658 ntBASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 KRT18P25-201ENST00000508931 1278 ntBASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 AC107373.2-201ENST00000607735 490 ntBASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC16.03■□□□□ 0.16
ARHGEF3Q9NR81 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ARHGEF3Q9NR81 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ARHGEF3Q9NR81 DRD5P1-201ENST00000456605 1438 ntBASIC16.02■□□□□ 0.16
ARHGEF3Q9NR81 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ARHGEF3Q9NR81 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
ARHGEF3Q9NR81 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ARHGEF3Q9NR81 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.02■□□□□ 0.16
ARHGEF3Q9NR81 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ARHGEF3Q9NR81 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ARHGEF3Q9NR81 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
ARHGEF3Q9NR81 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
ARHGEF3Q9NR81 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ARHGEF3Q9NR81 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ARHGEF3Q9NR81 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ARHGEF3Q9NR81 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ARHGEF3Q9NR81 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ARHGEF3Q9NR81 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
ARHGEF3Q9NR81 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
ARHGEF3Q9NR81 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.02■□□□□ 0.16
ARHGEF3Q9NR81 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ARHGEF3Q9NR81 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
ARHGEF3Q9NR81 AL662890.1-201ENST00000396818 632 ntBASIC16.02■□□□□ 0.16
ARHGEF3Q9NR81 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
ARHGEF3Q9NR81 AC005077.2-201ENST00000449786 690 ntBASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms