Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 RN7SL618P-201ENST00000477850 296 ntBASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 AC112482.1-201ENST00000492080 688 ntBASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 AL138828.2-201ENST00000615812 383 ntBASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 AL354702.1-201ENST00000442006 1960 ntBASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 AC055811.4-201ENST00000624039 1754 ntBASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 BEND3P1-201ENST00000421591 1944 ntBASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 TPT1P11-201ENST00000458482 498 ntBASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 HLA-V-204ENST00000476601 1289 ntBASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 AC000095.1-201ENST00000603208 874 ntBASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BBS1Q8NFJ9 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms