Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NKX2-5P52952 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC12.84□□□□□ -0.35
NKX2-5P52952 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NKX2-5P52952 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NKX2-5P52952 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC12.84□□□□□ -0.35
NKX2-5P52952 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.84□□□□□ -0.35
NKX2-5P52952 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.84□□□□□ -0.35
NKX2-5P52952 ZNF140-202ENST00000355557 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NKX2-5P52952 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
NKX2-5P52952 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NKX2-5P52952 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.84□□□□□ -0.35
NKX2-5P52952 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
NKX2-5P52952 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NKX2-5P52952 INTS6L-201ENST00000370752 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NKX2-5P52952 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
NKX2-5P52952 C2-209ENST00000452323 1999 ntTSL 2 BASIC12.84□□□□□ -0.35
NKX2-5P52952 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
NKX2-5P52952 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
NKX2-5P52952 AKAP8-201ENST00000269701 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NKX2-5P52952 ATXN2L-203ENST00000340394 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
NKX2-5P52952 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC12.84□□□□□ -0.35
NKX2-5P52952 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NKX2-5P52952 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NKX2-5P52952 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NKX2-5P52952 SPDYE21P-201ENST00000413323 827 ntBASIC12.84□□□□□ -0.35
NKX2-5P52952 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NKX2-5P52952 AC093724.1-201ENST00000448659 1027 ntBASIC12.84□□□□□ -0.35
NKX2-5P52952 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC12.84□□□□□ -0.35
NKX2-5P52952 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NKX2-5P52952 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NKX2-5P52952 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC12.84□□□□□ -0.35
NKX2-5P52952 P4HB-223ENST00000576390 439 ntTSL 4 BASIC12.84□□□□□ -0.35
NKX2-5P52952 CYB561-217ENST00000582997 877 ntTSL 5 BASIC12.84□□□□□ -0.35
NKX2-5P52952 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC12.84□□□□□ -0.35
NKX2-5P52952 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC12.84□□□□□ -0.35
NKX2-5P52952 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC12.84□□□□□ -0.35
NKX2-5P52952 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NKX2-5P52952 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
NKX2-5P52952 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NKX2-5P52952 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
NKX2-5P52952 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NKX2-5P52952 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC12.84□□□□□ -0.35
NKX2-5P52952 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NKX2-5P52952 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NKX2-5P52952 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
NKX2-5P52952 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.84□□□□□ -0.35
NKX2-5P52952 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
NKX2-5P52952 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NKX2-5P52952 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NKX2-5P52952 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
NKX2-5P52952 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
NKX2-5P52952 KRT18P22-201ENST00000402024 1347 ntBASIC12.84□□□□□ -0.35
NKX2-5P52952 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NKX2-5P52952 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NKX2-5P52952 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NKX2-5P52952 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
NKX2-5P52952 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
NKX2-5P52952 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
NKX2-5P52952 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NKX2-5P52952 SLC26A6-204ENST00000383733 2545 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NKX2-5P52952 ANAPC7-203ENST00000455511 3045 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
NKX2-5P52952 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
NKX2-5P52952 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.83□□□□□ -0.35
NKX2-5P52952 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.83□□□□□ -0.35
NKX2-5P52952 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
NKX2-5P52952 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
NKX2-5P52952 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
NKX2-5P52952 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NKX2-5P52952 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
NKX2-5P52952 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.83□□□□□ -0.36
NKX2-5P52952 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NKX2-5P52952 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NKX2-5P52952 EME1-202ENST00000393271 2354 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
NKX2-5P52952 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
NKX2-5P52952 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
NKX2-5P52952 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NKX2-5P52952 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
NKX2-5P52952 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NKX2-5P52952 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
NKX2-5P52952 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC12.83□□□□□ -0.36
NKX2-5P52952 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC12.83□□□□□ -0.36
NKX2-5P52952 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NKX2-5P52952 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NKX2-5P52952 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
NKX2-5P52952 AC010331.1-201ENST00000611423 582 ntBASIC12.83□□□□□ -0.36
NKX2-5P52952 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NKX2-5P52952 WT1-AS_2.1-201ENST00000613208 137 ntBASIC12.83□□□□□ -0.36
NKX2-5P52952 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
NKX2-5P52952 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NKX2-5P52952 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
NKX2-5P52952 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NKX2-5P52952 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NKX2-5P52952 CHTF18-201ENST00000262315 3090 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
NKX2-5P52952 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.83□□□□□ -0.36
NKX2-5P52952 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
NKX2-5P52952 AC135782.3-201ENST00000562782 2105 ntBASIC12.83□□□□□ -0.36
NKX2-5P52952 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NKX2-5P52952 AL358933.1-201ENST00000565046 2830 ntBASIC12.83□□□□□ -0.36
NKX2-5P52952 ATXN10-201ENST00000252934 3329 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NKX2-5P52952 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms