Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
BRCC3P46736 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
BRCC3P46736 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
BRCC3P46736 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
BRCC3P46736 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
BRCC3P46736 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
BRCC3P46736 BX284668.4-201ENST00000453917 508 ntBASIC15.98■□□□□ 0.15
BRCC3P46736 AC021723.1-201ENST00000486306 515 ntBASIC15.98■□□□□ 0.15
BRCC3P46736 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC15.98■□□□□ 0.15
BRCC3P46736 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.98■□□□□ 0.15
BRCC3P46736 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.98■□□□□ 0.15
BRCC3P46736 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC15.98■□□□□ 0.15
BRCC3P46736 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.98■□□□□ 0.15
BRCC3P46736 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BRCC3P46736 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BRCC3P46736 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.98■□□□□ 0.15
BRCC3P46736 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BRCC3P46736 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.98■□□□□ 0.15
BRCC3P46736 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
BRCC3P46736 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
BRCC3P46736 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BRCC3P46736 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BRCC3P46736 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
BRCC3P46736 FER1L4-210ENST00000615531 5998 ntBASIC15.98■□□□□ 0.15
BRCC3P46736 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BRCC3P46736 AC013268.4-201ENST00000637413 2228 ntBASIC15.98■□□□□ 0.15
BRCC3P46736 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BRCC3P46736 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BRCC3P46736 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BRCC3P46736 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
BRCC3P46736 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BRCC3P46736 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.97■□□□□ 0.15
BRCC3P46736 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.97■□□□□ 0.15
BRCC3P46736 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.97■□□□□ 0.15
BRCC3P46736 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BRCC3P46736 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.97■□□□□ 0.15
BRCC3P46736 AL109954.1-202ENST00000564051 2148 ntBASIC15.97■□□□□ 0.15
BRCC3P46736 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BRCC3P46736 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
BRCC3P46736 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.97■□□□□ 0.15
BRCC3P46736 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
BRCC3P46736 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.97■□□□□ 0.15
BRCC3P46736 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BRCC3P46736 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
BRCC3P46736 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
BRCC3P46736 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.97■□□□□ 0.15
BRCC3P46736 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BRCC3P46736 AC005077.2-201ENST00000449786 690 ntBASIC15.97■□□□□ 0.15
BRCC3P46736 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.97■□□□□ 0.15
BRCC3P46736 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.97■□□□□ 0.15
BRCC3P46736 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC15.97■□□□□ 0.15
BRCC3P46736 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.97■□□□□ 0.15
BRCC3P46736 NEU3-202ENST00000526068 431 ntTSL 2 BASIC15.97■□□□□ 0.15
BRCC3P46736 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BRCC3P46736 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC15.97■□□□□ 0.15
BRCC3P46736 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC15.97■□□□□ 0.15
BRCC3P46736 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.97■□□□□ 0.15
BRCC3P46736 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
BRCC3P46736 AC022748.3-201ENST00000621828 275 ntBASIC15.97■□□□□ 0.15
BRCC3P46736 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
BRCC3P46736 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
BRCC3P46736 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
BRCC3P46736 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.97■□□□□ 0.15
BRCC3P46736 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.97■□□□□ 0.15
BRCC3P46736 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
BRCC3P46736 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.97■□□□□ 0.15
BRCC3P46736 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
BRCC3P46736 KRT8P29-201ENST00000420409 1371 ntBASIC15.97■□□□□ 0.15
BRCC3P46736 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BRCC3P46736 AL596257.1-201ENST00000641463 2694 ntBASIC15.97■□□□□ 0.15
BRCC3P46736 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
BRCC3P46736 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BRCC3P46736 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
BRCC3P46736 SHC1P1-201ENST00000425230 1745 ntBASIC15.97■□□□□ 0.15
BRCC3P46736 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BRCC3P46736 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
BRCC3P46736 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
BRCC3P46736 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
BRCC3P46736 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
BRCC3P46736 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.96■□□□□ 0.15
BRCC3P46736 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
BRCC3P46736 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.96■□□□□ 0.15
BRCC3P46736 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
BRCC3P46736 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
BRCC3P46736 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.96■□□□□ 0.15
BRCC3P46736 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
BRCC3P46736 SALL4P5-201ENST00000419001 1760 ntBASIC15.96■□□□□ 0.15
BRCC3P46736 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
BRCC3P46736 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
BRCC3P46736 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.96■□□□□ 0.15
BRCC3P46736 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.96■□□□□ 0.15
BRCC3P46736 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
BRCC3P46736 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.96■□□□□ 0.15
BRCC3P46736 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.96■□□□□ 0.15
BRCC3P46736 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.96■□□□□ 0.15
BRCC3P46736 REEP1-202ENST00000453231 940 ntTSL 2 BASIC15.96■□□□□ 0.15
BRCC3P46736 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
BRCC3P46736 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC15.96■□□□□ 0.15
BRCC3P46736 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.96■□□□□ 0.15
BRCC3P46736 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms