Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
KRT9P35527 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
KRT9P35527 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT9P35527 AC022144.1-201ENST00000602255 1580 ntBASIC16.6■□□□□ 0.25
KRT9P35527 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
KRT9P35527 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT9P35527 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
KRT9P35527 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
KRT9P35527 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT9P35527 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC16.59■□□□□ 0.25
KRT9P35527 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC16.59■□□□□ 0.25
KRT9P35527 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
KRT9P35527 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT9P35527 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT9P35527 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
KRT9P35527 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT9P35527 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC16.59■□□□□ 0.25
KRT9P35527 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT9P35527 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT9P35527 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT9P35527 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT9P35527 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT9P35527 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT9P35527 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT9P35527 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.59■□□□□ 0.25
KRT9P35527 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.59■□□□□ 0.25
KRT9P35527 AC004890.2-204ENST00000481968 304 ntBASIC16.59■□□□□ 0.25
KRT9P35527 AC093214.1-201ENST00000511688 1107 ntBASIC16.59■□□□□ 0.25
KRT9P35527 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.59■□□□□ 0.25
KRT9P35527 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.59■□□□□ 0.25
KRT9P35527 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.59■□□□□ 0.25
KRT9P35527 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.59■□□□□ 0.25
KRT9P35527 AL390955.2-201ENST00000603032 514 ntBASIC16.59■□□□□ 0.25
KRT9P35527 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.59■□□□□ 0.25
KRT9P35527 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT9P35527 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT9P35527 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT9P35527 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT9P35527 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT9P35527 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.59■□□□□ 0.25
KRT9P35527 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT9P35527 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT9P35527 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
KRT9P35527 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC16.59■□□□□ 0.25
KRT9P35527 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT9P35527 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
KRT9P35527 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.59■□□□□ 0.25
KRT9P35527 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT9P35527 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
KRT9P35527 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT9P35527 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
KRT9P35527 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.58■□□□□ 0.25
KRT9P35527 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
KRT9P35527 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
KRT9P35527 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
KRT9P35527 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.58■□□□□ 0.25
KRT9P35527 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
KRT9P35527 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
KRT9P35527 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
KRT9P35527 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
KRT9P35527 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
KRT9P35527 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
KRT9P35527 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC16.58■□□□□ 0.24
KRT9P35527 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.58■□□□□ 0.24
KRT9P35527 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
KRT9P35527 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.58■□□□□ 0.24
KRT9P35527 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.58■□□□□ 0.24
KRT9P35527 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
KRT9P35527 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
KRT9P35527 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.58■□□□□ 0.24
KRT9P35527 AC135586.1-201ENST00000539323 574 ntBASIC16.58■□□□□ 0.24
KRT9P35527 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.58■□□□□ 0.24
KRT9P35527 SAMD11P1-201ENST00000571429 661 ntBASIC16.58■□□□□ 0.24
KRT9P35527 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.58■□□□□ 0.24
KRT9P35527 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.58■□□□□ 0.24
KRT9P35527 AC015802.1-201ENST00000588104 1449 ntBASIC16.58■□□□□ 0.24
KRT9P35527 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.58■□□□□ 0.24
KRT9P35527 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
KRT9P35527 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
KRT9P35527 C1R-201ENST00000535233 2211 ntTSL 2 BASIC16.58■□□□□ 0.24
KRT9P35527 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
KRT9P35527 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KRT9P35527 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
KRT9P35527 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
KRT9P35527 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
KRT9P35527 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
KRT9P35527 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
KRT9P35527 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
KRT9P35527 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KRT9P35527 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
KRT9P35527 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
KRT9P35527 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KRT9P35527 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
KRT9P35527 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.57■□□□□ 0.24
KRT9P35527 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
KRT9P35527 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.57■□□□□ 0.24
KRT9P35527 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.57■□□□□ 0.24
KRT9P35527 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
KRT9P35527 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
KRT9P35527 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms