Protein–RNA interactions for Protein: P0DPA2

VSIG8, V-set and immunoglobulin domain-containing protein 8, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG8P0DPA2 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VSIG8P0DPA2 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
VSIG8P0DPA2 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VSIG8P0DPA2 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VSIG8P0DPA2 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VSIG8P0DPA2 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VSIG8P0DPA2 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.04□□□□□ -0.32
VSIG8P0DPA2 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
VSIG8P0DPA2 AC055811.4-201ENST00000624039 1754 ntBASIC13.04□□□□□ -0.32
VSIG8P0DPA2 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VSIG8P0DPA2 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
VSIG8P0DPA2 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VSIG8P0DPA2 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VSIG8P0DPA2 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VSIG8P0DPA2 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VSIG8P0DPA2 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VSIG8P0DPA2 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VSIG8P0DPA2 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VSIG8P0DPA2 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VSIG8P0DPA2 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VSIG8P0DPA2 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.04□□□□□ -0.32
VSIG8P0DPA2 AC010327.5-201ENST00000586923 3061 ntBASIC13.04□□□□□ -0.32
VSIG8P0DPA2 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
VSIG8P0DPA2 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
VSIG8P0DPA2 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
VSIG8P0DPA2 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
VSIG8P0DPA2 RPL37AP1-201ENST00000412502 279 ntBASIC13.04□□□□□ -0.32
VSIG8P0DPA2 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.04□□□□□ -0.32
VSIG8P0DPA2 SPDYE7P-202ENST00000420373 878 ntBASIC13.04□□□□□ -0.32
VSIG8P0DPA2 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.04□□□□□ -0.32
VSIG8P0DPA2 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.04□□□□□ -0.32
VSIG8P0DPA2 ZNF736P11Y-201ENST00000442535 1213 ntBASIC13.04□□□□□ -0.32
VSIG8P0DPA2 ZNF736P12Y-201ENST00000443152 1243 ntBASIC13.04□□□□□ -0.32
VSIG8P0DPA2 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.04□□□□□ -0.32
VSIG8P0DPA2 ZNF736P4Y-201ENST00000454995 1243 ntBASIC13.04□□□□□ -0.32
VSIG8P0DPA2 TPT1P11-201ENST00000458482 498 ntBASIC13.04□□□□□ -0.32
VSIG8P0DPA2 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.04□□□□□ -0.32
VSIG8P0DPA2 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VSIG8P0DPA2 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VSIG8P0DPA2 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.04□□□□□ -0.32
VSIG8P0DPA2 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.04□□□□□ -0.32
VSIG8P0DPA2 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.04□□□□□ -0.32
VSIG8P0DPA2 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC13.04□□□□□ -0.32
VSIG8P0DPA2 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.04□□□□□ -0.32
VSIG8P0DPA2 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.04□□□□□ -0.32
VSIG8P0DPA2 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
VSIG8P0DPA2 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
VSIG8P0DPA2 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.04□□□□□ -0.32
VSIG8P0DPA2 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
VSIG8P0DPA2 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VSIG8P0DPA2 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.04□□□□□ -0.32
VSIG8P0DPA2 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VSIG8P0DPA2 AL360270.3-201ENST00000609118 1348 ntBASIC13.04□□□□□ -0.32
VSIG8P0DPA2 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VSIG8P0DPA2 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VSIG8P0DPA2 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VSIG8P0DPA2 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
VSIG8P0DPA2 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.04□□□□□ -0.32
VSIG8P0DPA2 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
VSIG8P0DPA2 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
VSIG8P0DPA2 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
VSIG8P0DPA2 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
VSIG8P0DPA2 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VSIG8P0DPA2 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VSIG8P0DPA2 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
VSIG8P0DPA2 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VSIG8P0DPA2 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.03□□□□□ -0.32
VSIG8P0DPA2 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VSIG8P0DPA2 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VSIG8P0DPA2 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VSIG8P0DPA2 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.03□□□□□ -0.32
VSIG8P0DPA2 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
VSIG8P0DPA2 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.03□□□□□ -0.32
VSIG8P0DPA2 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VSIG8P0DPA2 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VSIG8P0DPA2 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
VSIG8P0DPA2 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.03□□□□□ -0.32
VSIG8P0DPA2 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.03□□□□□ -0.32
VSIG8P0DPA2 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VSIG8P0DPA2 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VSIG8P0DPA2 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
VSIG8P0DPA2 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VSIG8P0DPA2 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC13.03□□□□□ -0.32
VSIG8P0DPA2 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.03□□□□□ -0.32
VSIG8P0DPA2 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.03□□□□□ -0.32
VSIG8P0DPA2 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC13.03□□□□□ -0.32
VSIG8P0DPA2 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.03□□□□□ -0.32
VSIG8P0DPA2 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
VSIG8P0DPA2 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
VSIG8P0DPA2 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VSIG8P0DPA2 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VSIG8P0DPA2 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
VSIG8P0DPA2 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
VSIG8P0DPA2 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.03□□□□□ -0.32
VSIG8P0DPA2 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.03□□□□□ -0.32
VSIG8P0DPA2 AC079791.1-201ENST00000605356 973 ntBASIC13.03□□□□□ -0.32
VSIG8P0DPA2 AC074044.1-201ENST00000609673 707 ntBASIC13.03□□□□□ -0.32
VSIG8P0DPA2 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.03□□□□□ -0.32
VSIG8P0DPA2 AP001059.3-201ENST00000619053 235 ntBASIC13.03□□□□□ -0.32
VSIG8P0DPA2 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms