RNA–Protein interactions for RNA: ENST00000440034.1

AC008080.4-202, humanhuman

TSL 3 BASIC

Gene AC008080.4, Length 1,005 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008080.4-202ENST00000440034 AEBP2Q6ZN18 517 aaPredicted RBP38.36■■■■□ 3.73
AC008080.4-202ENST00000440034 CHIC1Q5VXU3 224 aa36.22■■■■□ 3.39
AC008080.4-202ENST00000440034 SENP3Q9H4L4 574 aaPredicted RBP32.62■■■□□ 2.81
AC008080.4-202ENST00000440034 PHF23Q9BUL5 403 aaPredicted RBP32.23■■■□□ 2.75
AC008080.4-202ENST00000440034 FOXD1Q16676 465 aa30.5■■■□□ 2.47
AC008080.4-202ENST00000440034 PLPPR3Q6T4P5 718 aa28.83■■■□□ 2.21
AC008080.4-202ENST00000440034 MSH5O43196 834 aa28.51■■■□□ 2.15
AC008080.4-202ENST00000440034 PPP6R1Q9UPN7 881 aa28.46■■■□□ 2.15
AC008080.4-202ENST00000440034 PIAS4Q8N2W9 510 aaPredicted RBP28.41■■■□□ 2.14
AC008080.4-202ENST00000440034 ADRA2BP18089 450 aa28.32■■■□□ 2.12
AC008080.4-202ENST00000440034 POTEDQ86YR6 584 aa28.15■■■□□ 2.1
AC008080.4-202ENST00000440034 MAPK8IP2Q13387 824 aaPredicted RBP26.08■■□□□ 1.77
AC008080.4-202ENST00000440034 DMRT2Q9Y5R5 561 aa25.89■■□□□ 1.74
AC008080.4-202ENST00000440034 SCAF1Q9H7N4 1312 aaKnown RBP25.79■■□□□ 1.72
AC008080.4-202ENST00000440034 PPP4R3CPQ6ZMV5 832 aa25.29■■□□□ 1.64
AC008080.4-202ENST00000440034 HOXD11P31277 338 aaPredicted RBP24.89■■□□□ 1.58
AC008080.4-202ENST00000440034 CNKSR2Q8WXI2 1034 aa24.82■■□□□ 1.56
AC008080.4-202ENST00000440034 DCAF8L1A6NGE4 600 aa24.77■■□□□ 1.56
AC008080.4-202ENST00000440034 RNF216Q9NWF9 866 aaPredicted RBP24.64■■□□□ 1.54
AC008080.4-202ENST00000440034 CACNB1Q02641 598 aaPredicted RBP24.57■■□□□ 1.52
AC008080.4-202ENST00000440034 RNF39Q9H2S5 420 aa24.38■■□□□ 1.49
AC008080.4-202ENST00000440034 NCBP3Q53F19 620 aaKnown RBP24.19■■□□□ 1.46
AC008080.4-202ENST00000440034 DNAJC5BQ9UF47 199 aa24.02■■□□□ 1.44
AC008080.4-202ENST00000440034 C1QBPQ07021 282 aaKnown RBP23.96■■□□□ 1.43
AC008080.4-202ENST00000440034 NPM3O75607 178 aaKnown RBP23.94■■□□□ 1.42
AC008080.4-202ENST00000440034 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.65■■□□□ 1.38
AC008080.4-202ENST00000440034 KCNA4P22459 653 aa23.37■■□□□ 1.33
AC008080.4-202ENST00000440034 U3KPZ7 1027 aaPredicted RBP23.21■■□□□ 1.31
AC008080.4-202ENST00000440034 SLC4A2P04920 1241 aa22.94■■□□□ 1.26
AC008080.4-202ENST00000440034 SPINK5Q9NQ38 1064 aaPredicted RBP22.93■■□□□ 1.26
AC008080.4-202ENST00000440034 CAPN15O75808 1086 aa22.82■■□□□ 1.24
AC008080.4-202ENST00000440034 DSG3P32926 999 aa22.79■■□□□ 1.24
AC008080.4-202ENST00000440034 TRHP20396 242 aaPredicted RBP22.44■■□□□ 1.18
AC008080.4-202ENST00000440034 APLP2Q06481 763 aa22.39■■□□□ 1.17
AC008080.4-202ENST00000440034 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.38■■□□□ 1.17
AC008080.4-202ENST00000440034 HNRNPUL2Q1KMD3 747 aaKnown RBP22.38■■□□□ 1.17
AC008080.4-202ENST00000440034 ZNF219Q9P2Y4 722 aaPredicted RBP22.36■■□□□ 1.17
AC008080.4-202ENST00000440034 ABCB7O75027 752 aa22.33■■□□□ 1.17
AC008080.4-202ENST00000440034 SAMD1Q6SPF0 538 aaPredicted RBP22.27■■□□□ 1.16
AC008080.4-202ENST00000440034 MYCNP04198 464 aaPredicted RBP22.09■■□□□ 1.13
AC008080.4-202ENST00000440034 POTEHQ6S545 545 aa22.01■■□□□ 1.11
AC008080.4-202ENST00000440034 SLC4A1APQ9BWU0 796 aaKnown RBP21.97■■□□□ 1.11
AC008080.4-202ENST00000440034 POLA2Q14181 598 aa21.83■■□□□ 1.09
AC008080.4-202ENST00000440034 FOXD4L1Q9NU39 408 aa21.79■■□□□ 1.08
AC008080.4-202ENST00000440034 ATF5Q9Y2D1 282 aaPredicted RBP21.71■■□□□ 1.07
AC008080.4-202ENST00000440034 RBM42Q9BTD8 480 aaKnown RBP21.65■■□□□ 1.06
AC008080.4-202ENST00000440034 ZBTB22O15209 634 aa21.53■■□□□ 1.04
AC008080.4-202ENST00000440034 CHRDL2Q6WN34 429 aa21.29■■□□□ 1
AC008080.4-202ENST00000440034 ZBTB12Q9Y330 459 aaPredicted RBP21.28■■□□□ 1
AC008080.4-202ENST00000440034 AKT1S1Q96B36 256 aa21.17■□□□□ 0.98
AC008080.4-202ENST00000440034 OSCARQ8IYS5 282 aa21.14■□□□□ 0.97
AC008080.4-202ENST00000440034 ATXN8OSP0DMR3 200 aa21.13■□□□□ 0.97
AC008080.4-202ENST00000440034 REM2Q8IYK8 340 aaPredicted RBP21■□□□□ 0.95
AC008080.4-202ENST00000440034 PITPNM1O00562 1244 aa20.79■□□□□ 0.92
AC008080.4-202ENST00000440034 PIP4P2Q8N4L2 257 aa20.79■□□□□ 0.92
AC008080.4-202ENST00000440034 FBLN2P98095 1184 aa20.71■□□□□ 0.91
AC008080.4-202ENST00000440034 MKRN4PQ13434 485 aaPredicted RBP20.68■□□□□ 0.9
AC008080.4-202ENST00000440034 SPDYE2BA6NHP3 402 aa20.67■□□□□ 0.9
AC008080.4-202ENST00000440034 SPDYE6P0CI01 402 aa20.67■□□□□ 0.9
AC008080.4-202ENST00000440034 SPDYE2Q495Y8 402 aa20.67■□□□□ 0.9
AC008080.4-202ENST00000440034 FXR2P51116 673 aaKnown RBP eCLIP20.64■□□□□ 0.89
AC008080.4-202ENST00000440034 SP7Q8TDD2 431 aaPredicted RBP20.56■□□□□ 0.88
AC008080.4-202ENST00000440034 SSUH2Q9Y2M2 353 aa20.42■□□□□ 0.86
AC008080.4-202ENST00000440034 HAX1O00165 279 aa20.4■□□□□ 0.86
AC008080.4-202ENST00000440034 ZNF692Q9BU19 519 aaPredicted RBP20.4■□□□□ 0.86
AC008080.4-202ENST00000440034 CSRNP3Q8WYN3 585 aa20.37■□□□□ 0.85
AC008080.4-202ENST00000440034 SPDYE1Q8NFV5 336 aaPredicted RBP20.32■□□□□ 0.84
AC008080.4-202ENST00000440034 CLEC11AQ9Y240 323 aa20.31■□□□□ 0.84
AC008080.4-202ENST00000440034 EVX2Q03828 476 aa20.25■□□□□ 0.83
AC008080.4-202ENST00000440034 PRKAR2AP13861 404 aaKnown RBP20.22■□□□□ 0.83
AC008080.4-202ENST00000440034 PABPN1Q86U42 306 aaKnown RBP eCLIP20.11■□□□□ 0.81
AC008080.4-202ENST00000440034 CHADLQ6NUI6 762 aa20■□□□□ 0.79
AC008080.4-202ENST00000440034 C19orf67A6NJJ6 358 aa19.98■□□□□ 0.79
AC008080.4-202ENST00000440034 EHMT2Q96KQ7 1210 aa19.98■□□□□ 0.79
AC008080.4-202ENST00000440034 PRR29P0C7W0 189 aa19.95■□□□□ 0.78
AC008080.4-202ENST00000440034 GABBR2O75899 941 aa19.72■□□□□ 0.75
AC008080.4-202ENST00000440034 FARP1Q9Y4F1 1045 aaPredicted RBP19.66■□□□□ 0.74
AC008080.4-202ENST00000440034 CD44P16070 742 aaKnown RBP19.56■□□□□ 0.72
AC008080.4-202ENST00000440034 SPDYE4A6NLX3 237 aa19.55■□□□□ 0.72
AC008080.4-202ENST00000440034 CREBZFQ9NS37 354 aa19.49■□□□□ 0.71
AC008080.4-202ENST00000440034 STAG3Q9UJ98 1225 aa19.47■□□□□ 0.71
AC008080.4-202ENST00000440034 POTEIP0CG38 1075 aa19.36■□□□□ 0.69
AC008080.4-202ENST00000440034 LHX8Q68G74 356 aa19.28■□□□□ 0.68
AC008080.4-202ENST00000440034 CLCN6P51797 869 aa19.27■□□□□ 0.68
AC008080.4-202ENST00000440034 ZNF579Q8NAF0 562 aaKnown RBP19.27■□□□□ 0.68
AC008080.4-202ENST00000440034 ZRANB1Q9UGI0 708 aa19.26■□□□□ 0.67
AC008080.4-202ENST00000440034 MNX1P50219 401 aaPredicted RBP19.17■□□□□ 0.66
AC008080.4-202ENST00000440034 PROM2Q8N271 834 aa19.12■□□□□ 0.65
AC008080.4-202ENST00000440034 DCBLD2Q96PD2 775 aa19.09■□□□□ 0.65
AC008080.4-202ENST00000440034 GALR2O43603 387 aaPredicted RBP19.08■□□□□ 0.64
AC008080.4-202ENST00000440034 NPM1P06748 294 aaKnown RBP eCLIP19.03■□□□□ 0.64
AC008080.4-202ENST00000440034 PHF12Q96QT6 1004 aa19.02■□□□□ 0.64
AC008080.4-202ENST00000440034 PAK3O75914 559 aaPredicted RBP18.99■□□□□ 0.63
AC008080.4-202ENST00000440034 PELP1Q8IZL8 1130 aaKnown RBP18.76■□□□□ 0.59
AC008080.4-202ENST00000440034 MS4A3Q96HJ5 214 aa18.76■□□□□ 0.59
AC008080.4-202ENST00000440034 POTEB2H3BUK9 544 aa18.73■□□□□ 0.59
AC008080.4-202ENST00000440034 TSPYL2Q9H2G4 693 aaPredicted RBP18.73■□□□□ 0.59
AC008080.4-202ENST00000440034 CCDC61Q9Y6R9 512 aa18.69■□□□□ 0.58
AC008080.4-202ENST00000440034 ASTLQ6HA08 431 aaPredicted RBP18.66■□□□□ 0.58
AC008080.4-202ENST00000440034 MIER1Q8N108 512 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms