Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.46■□□□□ 0.22
VTNP04004 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
VTNP04004 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
VTNP04004 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.45■□□□□ 0.22
VTNP04004 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.45■□□□□ 0.22
VTNP04004 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.45■□□□□ 0.22
VTNP04004 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VTNP04004 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
VTNP04004 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VTNP04004 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.45■□□□□ 0.22
VTNP04004 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
VTNP04004 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
VTNP04004 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VTNP04004 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
VTNP04004 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VTNP04004 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
VTNP04004 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VTNP04004 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.45■□□□□ 0.22
VTNP04004 AC016700.1-201ENST00000429424 312 ntBASIC16.45■□□□□ 0.22
VTNP04004 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VTNP04004 ADM-202ENST00000524948 584 ntTSL 2 BASIC16.45■□□□□ 0.22
VTNP04004 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.45■□□□□ 0.22
VTNP04004 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VTNP04004 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC16.45■□□□□ 0.22
VTNP04004 AC009955.4-201ENST00000597192 544 ntBASIC16.45■□□□□ 0.22
VTNP04004 AL162426.1-201ENST00000624141 743 ntBASIC16.45■□□□□ 0.22
VTNP04004 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.45■□□□□ 0.22
VTNP04004 AC068587.10-201ENST00000641210 219 ntBASIC16.45■□□□□ 0.22
VTNP04004 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
VTNP04004 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.45■□□□□ 0.22
VTNP04004 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
VTNP04004 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.45■□□□□ 0.22
VTNP04004 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VTNP04004 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VTNP04004 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
VTNP04004 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
VTNP04004 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
VTNP04004 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.45■□□□□ 0.22
VTNP04004 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VTNP04004 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VTNP04004 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
VTNP04004 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VTNP04004 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.44■□□□□ 0.22
VTNP04004 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.44■□□□□ 0.22
VTNP04004 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VTNP04004 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.44■□□□□ 0.22
VTNP04004 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.44■□□□□ 0.22
VTNP04004 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
VTNP04004 SALL4P5-201ENST00000419001 1760 ntBASIC16.44■□□□□ 0.22
VTNP04004 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
VTNP04004 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VTNP04004 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.44■□□□□ 0.22
VTNP04004 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VTNP04004 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
VTNP04004 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
VTNP04004 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.44■□□□□ 0.22
VTNP04004 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.44■□□□□ 0.22
VTNP04004 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.44■□□□□ 0.22
VTNP04004 SLC25A24P2-201ENST00000415059 510 ntBASIC16.44■□□□□ 0.22
VTNP04004 DEF8-202ENST00000418391 852 ntTSL 2 BASIC16.44■□□□□ 0.22
VTNP04004 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC16.44■□□□□ 0.22
VTNP04004 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VTNP04004 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC16.44■□□□□ 0.22
VTNP04004 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
VTNP04004 AC138649.2-201ENST00000615886 705 ntBASIC16.44■□□□□ 0.22
VTNP04004 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC16.44■□□□□ 0.22
VTNP04004 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
VTNP04004 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VTNP04004 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VTNP04004 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
VTNP04004 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.44■□□□□ 0.22
VTNP04004 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.44■□□□□ 0.22
VTNP04004 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
VTNP04004 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.44■□□□□ 0.22
VTNP04004 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VTNP04004 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VTNP04004 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VTNP04004 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.44■□□□□ 0.22
VTNP04004 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.43■□□□□ 0.22
VTNP04004 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
VTNP04004 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
VTNP04004 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VTNP04004 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.43■□□□□ 0.22
VTNP04004 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.43■□□□□ 0.22
VTNP04004 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.43■□□□□ 0.22
VTNP04004 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VTNP04004 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VTNP04004 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VTNP04004 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VTNP04004 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.43■□□□□ 0.22
VTNP04004 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.43■□□□□ 0.22
VTNP04004 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VTNP04004 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VTNP04004 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VTNP04004 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VTNP04004 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
VTNP04004 AC010141.1-201ENST00000411585 623 ntBASIC16.43■□□□□ 0.22
VTNP04004 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC16.43■□□□□ 0.22
VTNP04004 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC16.43■□□□□ 0.22
VTNP04004 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms