Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SNCGO76070 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
SNCGO76070 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
SNCGO76070 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC10.21□□□□□ -0.77
SNCGO76070 HCG4-201ENST00000418983 998 ntBASIC10.21□□□□□ -0.77
SNCGO76070 AL158047.1-201ENST00000445918 881 ntBASIC10.21□□□□□ -0.77
SNCGO76070 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
SNCGO76070 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
SNCGO76070 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC10.21□□□□□ -0.77
SNCGO76070 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC10.21□□□□□ -0.77
SNCGO76070 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC10.21□□□□□ -0.77
SNCGO76070 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
SNCGO76070 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC10.21□□□□□ -0.77
SNCGO76070 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
SNCGO76070 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC10.21□□□□□ -0.77
SNCGO76070 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
SNCGO76070 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
SNCGO76070 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SNCGO76070 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SNCGO76070 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC10.21□□□□□ -0.78
SNCGO76070 AP5S1-205ENST00000615891 5362 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SNCGO76070 MYO18B-205ENST00000536101 8051 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
SNCGO76070 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SNCGO76070 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
SNCGO76070 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC10.21□□□□□ -0.78
SNCGO76070 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC10.21□□□□□ -0.78
SNCGO76070 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
SNCGO76070 TRO-201ENST00000173898 4647 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.78
SNCGO76070 PSAPL1-201ENST00000319098 4680 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
SNCGO76070 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC10.21□□□□□ -0.78
SNCGO76070 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC10.21□□□□□ -0.78
SNCGO76070 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.78
SNCGO76070 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC10.21□□□□□ -0.78
SNCGO76070 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC10.21□□□□□ -0.78
SNCGO76070 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
SNCGO76070 BRD4-201ENST00000263377 7169 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
SNCGO76070 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC10.21□□□□□ -0.78
SNCGO76070 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC10.21□□□□□ -0.78
SNCGO76070 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SNCGO76070 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SNCGO76070 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.78
SNCGO76070 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.78
SNCGO76070 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
SNCGO76070 RAD51D-202ENST00000345365 9988 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SNCGO76070 NFASC-202ENST00000360049 10120 ntAPPRIS P3 TSL 5 BASIC10.21□□□□□ -0.78
SNCGO76070 AC152010.1-201ENST00000415779 2006 ntBASIC10.21□□□□□ -0.78
SNCGO76070 NFASC-225ENST00000539706 10135 ntAPPRIS ALT1 TSL 5 BASIC10.21□□□□□ -0.78
SNCGO76070 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
SNCGO76070 CCDC14-220ENST00000488653 4156 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
SNCGO76070 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
SNCGO76070 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
SNCGO76070 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
SNCGO76070 AL133216.2-201ENST00000622550 7213 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
SNCGO76070 NPC1L1-204ENST00000546276 4826 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
SNCGO76070 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SNCGO76070 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
SNCGO76070 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SNCGO76070 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SNCGO76070 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SNCGO76070 ZBED4-201ENST00000216268 6893 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SNCGO76070 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SNCGO76070 PLEKHG4-204ENST00000427155 4455 ntAPPRIS P3 TSL 5 BASIC10.2□□□□□ -0.78
SNCGO76070 PLEKHG4-202ENST00000379344 4513 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
SNCGO76070 ICOSLG-204ENST00000407780 7080 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
SNCGO76070 GPR107-202ENST00000372406 7353 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SNCGO76070 PTCH1-205ENST00000418258 7815 ntTSL 5 BASIC10.2□□□□□ -0.78
SNCGO76070 MECP2-201ENST00000303391 10505 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SNCGO76070 ANO3-201ENST00000256737 6642 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
SNCGO76070 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SNCGO76070 CACNA1C-203ENST00000344100 6634 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
SNCGO76070 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SNCGO76070 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
SNCGO76070 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SNCGO76070 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SNCGO76070 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
SNCGO76070 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SNCGO76070 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
SNCGO76070 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC10.2□□□□□ -0.78
SNCGO76070 LIN28AP1-201ENST00000429574 405 ntBASIC10.2□□□□□ -0.78
SNCGO76070 MEG3-211ENST00000452514 461 ntTSL 3 BASIC10.2□□□□□ -0.78
SNCGO76070 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SNCGO76070 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
SNCGO76070 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SNCGO76070 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC10.2□□□□□ -0.78
SNCGO76070 TIAM2-212ENST00000529824 5262 ntTSL 5 BASIC10.2□□□□□ -0.78
SNCGO76070 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SNCGO76070 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SNCGO76070 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
SNCGO76070 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
SNCGO76070 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC10.2□□□□□ -0.78
SNCGO76070 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SNCGO76070 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SNCGO76070 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC10.2□□□□□ -0.78
SNCGO76070 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC10.2□□□□□ -0.78
SNCGO76070 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
SNCGO76070 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
SNCGO76070 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
SNCGO76070 ILF3-AS1-201ENST00000591501 1983 ntBASIC10.2□□□□□ -0.78
SNCGO76070 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SNCGO76070 IGHV3-41-201ENST00000613121 348 ntBASIC10.2□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 9.7 ms