RNA–Protein interactions for RNA: ENST00000344100.7

CACNA1C-203, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-203ENST00000344100 DCAF8L2P0C7V8 631 aa20.29■□□□□ 0.84
CACNA1C-203ENST00000344100 NISCHQ9Y2I1 1504 aa18.57■□□□□ 0.56
CACNA1C-203ENST00000344100 SUPT5HO00267 1087 aaKnown RBP18.55■□□□□ 0.56
CACNA1C-203ENST00000344100 FAM9AQ8IZU1 332 aaPredicted RBP18.41■□□□□ 0.54
CACNA1C-203ENST00000344100 SHROOM4Q9ULL8 1493 aa18.33■□□□□ 0.52
CACNA1C-203ENST00000344100 EHMT2Q96KQ7 1210 aa18.21■□□□□ 0.51
CACNA1C-203ENST00000344100 APLP2Q06481 763 aa18.1■□□□□ 0.49
CACNA1C-203ENST00000344100 ATP1B4Q9UN42 357 aaPredicted RBP17.68■□□□□ 0.42
CACNA1C-203ENST00000344100 RANGAP1P46060 587 aaPredicted RBP17.63■□□□□ 0.41
CACNA1C-203ENST00000344100 TTBK1Q5TCY1 1321 aaPredicted RBP17.52■□□□□ 0.4
CACNA1C-203ENST00000344100 PELP1Q8IZL8 1130 aaKnown RBP17.51■□□□□ 0.39
CACNA1C-203ENST00000344100 MYT1LQ9UL68 1186 aa17.38■□□□□ 0.37
CACNA1C-203ENST00000344100 TRIM41Q8WV44 630 aa17.25■□□□□ 0.35
CACNA1C-203ENST00000344100 UBTFP17480 764 aaKnown RBP17.24■□□□□ 0.35
CACNA1C-203ENST00000344100 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.17■□□□□ 0.34
CACNA1C-203ENST00000344100 HNRNPUL2Q1KMD3 747 aaKnown RBP17.17■□□□□ 0.34
CACNA1C-203ENST00000344100 PCGF6Q9BYE7 350 aa17.01■□□□□ 0.31
CACNA1C-203ENST00000344100 CHIC1Q5VXU3 224 aa16.97■□□□□ 0.31
CACNA1C-203ENST00000344100 CCER1Q8TC90 406 aaPredicted RBP16.88■□□□□ 0.29
CACNA1C-203ENST00000344100 ERICH6Q7L0X2 663 aa16.8■□□□□ 0.28
CACNA1C-203ENST00000344100 ABCC9O60706 1549 aa16.76■□□□□ 0.27
CACNA1C-203ENST00000344100 POLR3GLQ9BT43 218 aa16.71■□□□□ 0.27
CACNA1C-203ENST00000344100 SLC4A1APQ9BWU0 796 aaKnown RBP16.71■□□□□ 0.27
CACNA1C-203ENST00000344100 PABPN1Q86U42 306 aaKnown RBP eCLIP16.7■□□□□ 0.26
CACNA1C-203ENST00000344100 ITGAEP38570 1179 aa16.68■□□□□ 0.26
CACNA1C-203ENST00000344100 ZEB1P37275 1124 aaPredicted RBP16.65■□□□□ 0.26
CACNA1C-203ENST00000344100 NEFLP07196 543 aa16.61■□□□□ 0.25
CACNA1C-203ENST00000344100 FBLN2P98095 1184 aa16.61■□□□□ 0.25
CACNA1C-203ENST00000344100 CENPBP07199 599 aaPredicted RBP16.59■□□□□ 0.25
CACNA1C-203ENST00000344100 PPARGC1BQ86YN6 1023 aaKnown RBP16.55■□□□□ 0.24
CACNA1C-203ENST00000344100 MYT1Q01538 1121 aa16.48■□□□□ 0.23
CACNA1C-203ENST00000344100 BCANQ96GW7 911 aa16.43■□□□□ 0.22
CACNA1C-203ENST00000344100 CNGB1Q14028 1251 aaPredicted RBP16.4■□□□□ 0.22
CACNA1C-203ENST00000344100 YTHDC1Q96MU7 727 aaKnown RBP16.36■□□□□ 0.21
CACNA1C-203ENST00000344100 FAM50AQ14320 339 aaKnown RBP16.33■□□□□ 0.2
CACNA1C-203ENST00000344100 TRIM52Q96A61 297 aa16.32■□□□□ 0.2
CACNA1C-203ENST00000344100 ESF1Q9H501 851 aaKnown RBP16.32■□□□□ 0.2
CACNA1C-203ENST00000344100 DAXXQ9UER7 740 aaPredicted RBP16.31■□□□□ 0.2
CACNA1C-203ENST00000344100 PLPPR3Q6T4P5 718 aa16.22■□□□□ 0.19
CACNA1C-203ENST00000344100 SLC24A1O60721 1099 aa16.21■□□□□ 0.18
CACNA1C-203ENST00000344100 NPM1P06748 294 aaKnown RBP eCLIP16.21■□□□□ 0.18
CACNA1C-203ENST00000344100 TRIM26Q12899 539 aaPredicted RBP16.11■□□□□ 0.17
CACNA1C-203ENST00000344100 ARID3CA6NKF2 412 aa16.1■□□□□ 0.17
CACNA1C-203ENST00000344100 ZNF326Q5BKZ1 582 aaKnown RBP16.09■□□□□ 0.17
CACNA1C-203ENST00000344100 STAG3Q9UJ98 1225 aa16.08■□□□□ 0.17
CACNA1C-203ENST00000344100 CLSPNQ9HAW4 1339 aa16.05■□□□□ 0.16
CACNA1C-203ENST00000344100 NEFMP07197 916 aa16.03■□□□□ 0.16
CACNA1C-203ENST00000344100 ZNF777Q9ULD5 760 aaPredicted RBP16.03■□□□□ 0.16
CACNA1C-203ENST00000344100 ZBTB47Q9UFB7 747 aaPredicted RBP16.03■□□□□ 0.16
CACNA1C-203ENST00000344100 CDK11AQ9UQ88 783 aaPredicted RBP15.99■□□□□ 0.15
CACNA1C-203ENST00000344100 P3H3Q8IVL6 736 aa15.98■□□□□ 0.15
CACNA1C-203ENST00000344100 NEUROD1Q13562 356 aa15.98■□□□□ 0.15
CACNA1C-203ENST00000344100 LOC105371045A0A1W2PR82 267 aa15.97■□□□□ 0.15
CACNA1C-203ENST00000344100 CHGAP10645 457 aaKnown RBP15.92■□□□□ 0.14
CACNA1C-203ENST00000344100 ZNF316A6NFI3 1004 aaPredicted RBP15.89■□□□□ 0.13
CACNA1C-203ENST00000344100 SCRIBQ14160 1630 aa15.85■□□□□ 0.13
CACNA1C-203ENST00000344100 SCAF1Q9H7N4 1312 aaKnown RBP15.83■□□□□ 0.13
CACNA1C-203ENST00000344100 CANXP27824 592 aaKnown RBP15.82■□□□□ 0.12
CACNA1C-203ENST00000344100 BCL11AQ9H165 835 aa15.8■□□□□ 0.12
CACNA1C-203ENST00000344100 CHMP7Q8WUX9 453 aaPredicted RBP15.78■□□□□ 0.12
CACNA1C-203ENST00000344100 A0A0G2JS52 829 aa15.73■□□□□ 0.11
CACNA1C-203ENST00000344100 ARID4BQ4LE39 1312 aaPredicted RBP15.68■□□□□ 0.1
CACNA1C-203ENST00000344100 ANP32CO43423 234 aa15.67■□□□□ 0.1
CACNA1C-203ENST00000344100 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.66■□□□□ 0.1
CACNA1C-203ENST00000344100 C14orf37Q86TY3 774 aa15.66■□□□□ 0.1
CACNA1C-203ENST00000344100 HRCP23327 699 aa15.64■□□□□ 0.09
CACNA1C-203ENST00000344100 ERCC6Q03468 1493 aa15.62■□□□□ 0.09
CACNA1C-203ENST00000344100 HAP1P54257 671 aaPredicted RBP15.6■□□□□ 0.09
CACNA1C-203ENST00000344100 CSRNP3Q8WYN3 585 aa15.6■□□□□ 0.09
CACNA1C-203ENST00000344100 ZBTB7CA1YPR0 619 aa15.6■□□□□ 0.09
CACNA1C-203ENST00000344100 PPP1R15AO75807 674 aaPredicted RBP15.6■□□□□ 0.09
CACNA1C-203ENST00000344100 TRHP20396 242 aaPredicted RBP15.6■□□□□ 0.09
CACNA1C-203ENST00000344100 RB1CC1Q8TDY2 1594 aa15.59■□□□□ 0.09
CACNA1C-203ENST00000344100 NPM2Q86SE8 214 aaKnown RBP15.56■□□□□ 0.08
CACNA1C-203ENST00000344100 PLEKHG5O94827 1062 aa15.55■□□□□ 0.08
CACNA1C-203ENST00000344100 RTL5Q5HYW3 569 aaPredicted RBP15.54■□□□□ 0.08
CACNA1C-203ENST00000344100 KCNH8Q96L42 1107 aa15.54■□□□□ 0.08
CACNA1C-203ENST00000344100 TSPY4P0CV99 314 aa15.53■□□□□ 0.08
CACNA1C-203ENST00000344100 TSPY10P0CW01 314 aa15.53■□□□□ 0.08
CACNA1C-203ENST00000344100 DIEXFQ68CQ4 756 aaKnown RBP15.47■□□□□ 0.07
CACNA1C-203ENST00000344100 SENP3Q9H4L4 574 aaPredicted RBP15.45■□□□□ 0.06
CACNA1C-203ENST00000344100 CHIC2Q9UKJ5 165 aa15.44■□□□□ 0.06
CACNA1C-203ENST00000344100 TONSLQ96HA7 1378 aa15.4■□□□□ 0.06
CACNA1C-203ENST00000344100 CCDC180Q9P1Z9 1646 aa15.4■□□□□ 0.06
CACNA1C-203ENST00000344100 PLEKHD1A6NEE1 506 aa15.39■□□□□ 0.05
CACNA1C-203ENST00000344100 MTUS2Q5JR59 1369 aa15.38■□□□□ 0.05
CACNA1C-203ENST00000344100 KDM2AQ9Y2K7 1162 aa15.34■□□□□ 0.05
CACNA1C-203ENST00000344100 ARXQ96QS3 562 aa15.29■□□□□ 0.04
CACNA1C-203ENST00000344100 WDR43Q15061 677 aaKnown RBP eCLIP15.28■□□□□ 0.04
CACNA1C-203ENST00000344100 LMOD2Q6P5Q4 547 aa15.28■□□□□ 0.04
CACNA1C-203ENST00000344100 NPHP1O15259 732 aa15.27■□□□□ 0.04
CACNA1C-203ENST00000344100 BAZ1BQ9UIG0 1483 aaKnown RBP15.27■□□□□ 0.04
CACNA1C-203ENST00000344100 ZCCHC6Q5VYS8 1495 aaKnown RBP15.23■□□□□ 0.03
CACNA1C-203ENST00000344100 HSP90AA1P07900 732 aaKnown RBP15.23■□□□□ 0.03
CACNA1C-203ENST00000344100 RSF1Q96T23 1441 aaPredicted RBP15.22■□□□□ 0.03
CACNA1C-203ENST00000344100 TMC1Q8TDI8 760 aa15.21■□□□□ 0.03
CACNA1C-203ENST00000344100 NACADO15069 1562 aa15.2■□□□□ 0.02
CACNA1C-203ENST00000344100 MLECQ14165 292 aa15.19■□□□□ 0.02
CACNA1C-203ENST00000344100 MYH16Q9H6N6 1097 aa15.19■□□□□ 0.02
CACNA1C-203ENST00000344100 UPF2Q9HAU5 1272 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms