RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 DCAF8L2P0C7V8 631 aa19.65■□□□□ 0.74
PTCH1-205ENST00000418258 SUPT5HO00267 1087 aaKnown RBP18.28■□□□□ 0.52
PTCH1-205ENST00000418258 EHMT2Q96KQ7 1210 aa18.07■□□□□ 0.48
PTCH1-205ENST00000418258 SHROOM4Q9ULL8 1493 aa17.95■□□□□ 0.46
PTCH1-205ENST00000418258 APLP2Q06481 763 aa17.74■□□□□ 0.43
PTCH1-205ENST00000418258 NISCHQ9Y2I1 1504 aa17.73■□□□□ 0.43
PTCH1-205ENST00000418258 PELP1Q8IZL8 1130 aaKnown RBP17.73■□□□□ 0.43
PTCH1-205ENST00000418258 FAM9AQ8IZU1 332 aaPredicted RBP17.72■□□□□ 0.43
PTCH1-205ENST00000418258 TTBK1Q5TCY1 1321 aaPredicted RBP17.43■□□□□ 0.38
PTCH1-205ENST00000418258 RANGAP1P46060 587 aaPredicted RBP17.32■□□□□ 0.36
PTCH1-205ENST00000418258 ATP1B4Q9UN42 357 aaPredicted RBP17.3■□□□□ 0.36
PTCH1-205ENST00000418258 PCGF6Q9BYE7 350 aa17.1■□□□□ 0.33
PTCH1-205ENST00000418258 ERICH6Q7L0X2 663 aa17.08■□□□□ 0.33
PTCH1-205ENST00000418258 CCER1Q8TC90 406 aaPredicted RBP16.97■□□□□ 0.31
PTCH1-205ENST00000418258 UBTFP17480 764 aaKnown RBP16.91■□□□□ 0.3
PTCH1-205ENST00000418258 TRIM41Q8WV44 630 aa16.91■□□□□ 0.3
PTCH1-205ENST00000418258 CENPBP07199 599 aaPredicted RBP16.83■□□□□ 0.28
PTCH1-205ENST00000418258 MYT1LQ9UL68 1186 aa16.82■□□□□ 0.28
PTCH1-205ENST00000418258 NEFLP07196 543 aa16.72■□□□□ 0.27
PTCH1-205ENST00000418258 ZEB1P37275 1124 aaPredicted RBP16.69■□□□□ 0.26
PTCH1-205ENST00000418258 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.64■□□□□ 0.25
PTCH1-205ENST00000418258 HNRNPUL2Q1KMD3 747 aaKnown RBP16.64■□□□□ 0.25
PTCH1-205ENST00000418258 YTHDC1Q96MU7 727 aaKnown RBP16.6■□□□□ 0.25
PTCH1-205ENST00000418258 CHIC1Q5VXU3 224 aa16.59■□□□□ 0.25
PTCH1-205ENST00000418258 POLR3GLQ9BT43 218 aa16.56■□□□□ 0.24
PTCH1-205ENST00000418258 PPARGC1BQ86YN6 1023 aaKnown RBP16.54■□□□□ 0.24
PTCH1-205ENST00000418258 ITGAEP38570 1179 aa16.47■□□□□ 0.23
PTCH1-205ENST00000418258 DAXXQ9UER7 740 aaPredicted RBP16.45■□□□□ 0.22
PTCH1-205ENST00000418258 SLC4A1APQ9BWU0 796 aaKnown RBP16.44■□□□□ 0.22
PTCH1-205ENST00000418258 CNGB1Q14028 1251 aaPredicted RBP16.39■□□□□ 0.21
PTCH1-205ENST00000418258 MYT1Q01538 1121 aa16.23■□□□□ 0.19
PTCH1-205ENST00000418258 TRIM26Q12899 539 aaPredicted RBP16.13■□□□□ 0.17
PTCH1-205ENST00000418258 CLSPNQ9HAW4 1339 aa16.09■□□□□ 0.17
PTCH1-205ENST00000418258 ZNF316A6NFI3 1004 aaPredicted RBP16.02■□□□□ 0.16
PTCH1-205ENST00000418258 FAM50AQ14320 339 aaKnown RBP16.01■□□□□ 0.15
PTCH1-205ENST00000418258 SLC24A1O60721 1099 aa15.98■□□□□ 0.15
PTCH1-205ENST00000418258 TRIM52Q96A61 297 aa15.97■□□□□ 0.15
PTCH1-205ENST00000418258 LOC105371045A0A1W2PR82 267 aa15.94■□□□□ 0.14
PTCH1-205ENST00000418258 FBLN2P98095 1184 aa15.93■□□□□ 0.14
PTCH1-205ENST00000418258 BCANQ96GW7 911 aa15.92■□□□□ 0.14
PTCH1-205ENST00000418258 HRCP23327 699 aa15.88■□□□□ 0.13
PTCH1-205ENST00000418258 PABPN1Q86U42 306 aaKnown RBP eCLIP15.86■□□□□ 0.13
PTCH1-205ENST00000418258 ZBTB47Q9UFB7 747 aaPredicted RBP15.86■□□□□ 0.13
PTCH1-205ENST00000418258 NEUROD1Q13562 356 aa15.84■□□□□ 0.13
PTCH1-205ENST00000418258 ZNF326Q5BKZ1 582 aaKnown RBP15.83■□□□□ 0.13
PTCH1-205ENST00000418258 BCL11AQ9H165 835 aa15.82■□□□□ 0.12
PTCH1-205ENST00000418258 RTL5Q5HYW3 569 aaPredicted RBP15.82■□□□□ 0.12
PTCH1-205ENST00000418258 ABCC9O60706 1549 aa15.8■□□□□ 0.12
PTCH1-205ENST00000418258 NEFMP07197 916 aa15.71■□□□□ 0.11
PTCH1-205ENST00000418258 CANXP27824 592 aaKnown RBP15.69■□□□□ 0.1
PTCH1-205ENST00000418258 DIEXFQ68CQ4 756 aaKnown RBP15.68■□□□□ 0.1
PTCH1-205ENST00000418258 PLPPR3Q6T4P5 718 aa15.66■□□□□ 0.1
PTCH1-205ENST00000418258 ESF1Q9H501 851 aaKnown RBP15.65■□□□□ 0.1
PTCH1-205ENST00000418258 ARID3CA6NKF2 412 aa15.64■□□□□ 0.09
PTCH1-205ENST00000418258 ANP32CO43423 234 aa15.61■□□□□ 0.09
PTCH1-205ENST00000418258 ZNF777Q9ULD5 760 aaPredicted RBP15.55■□□□□ 0.08
PTCH1-205ENST00000418258 P3H3Q8IVL6 736 aa15.55■□□□□ 0.08
PTCH1-205ENST00000418258 STAG3Q9UJ98 1225 aa15.54■□□□□ 0.08
PTCH1-205ENST00000418258 CDK11AQ9UQ88 783 aaPredicted RBP15.49■□□□□ 0.07
PTCH1-205ENST00000418258 CHGAP10645 457 aaKnown RBP15.46■□□□□ 0.07
PTCH1-205ENST00000418258 NPM1P06748 294 aaKnown RBP eCLIP15.41■□□□□ 0.06
PTCH1-205ENST00000418258 SCAF1Q9H7N4 1312 aaKnown RBP15.37■□□□□ 0.05
PTCH1-205ENST00000418258 A0A0G2JS52 829 aa15.31■□□□□ 0.04
PTCH1-205ENST00000418258 HSP90AA1P07900 732 aaKnown RBP15.31■□□□□ 0.04
PTCH1-205ENST00000418258 NPM2Q86SE8 214 aaKnown RBP15.28■□□□□ 0.04
PTCH1-205ENST00000418258 ANP32AP39687 249 aaKnown RBP15.27■□□□□ 0.03
PTCH1-205ENST00000418258 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.25■□□□□ 0.03
PTCH1-205ENST00000418258 GTF3C3Q9Y5Q9 886 aa15.24■□□□□ 0.03
PTCH1-205ENST00000418258 ANP32BQ92688 251 aaKnown RBP15.23■□□□□ 0.03
PTCH1-205ENST00000418258 SCRIBQ14160 1630 aa15.22■□□□□ 0.03
PTCH1-205ENST00000418258 PLEKHG5O94827 1062 aa15.2■□□□□ 0.02
PTCH1-205ENST00000418258 UPF2Q9HAU5 1272 aaKnown RBP15.18■□□□□ 0.02
PTCH1-205ENST00000418258 SALL2Q9Y467 1007 aaPredicted RBP15.17■□□□□ 0.02
PTCH1-205ENST00000418258 TONSLQ96HA7 1378 aa15.17■□□□□ 0.02
PTCH1-205ENST00000418258 ZBTB7CA1YPR0 619 aa15.16■□□□□ 0.02
PTCH1-205ENST00000418258 CSRNP3Q8WYN3 585 aa15.14■□□□□ 0.01
PTCH1-205ENST00000418258 SENP3Q9H4L4 574 aaPredicted RBP15.14■□□□□ 0.01
PTCH1-205ENST00000418258 C14orf37Q86TY3 774 aa15.13■□□□□ 0.01
PTCH1-205ENST00000418258 FAM9BQ8IZU0 186 aa15.1■□□□□ 0.01
PTCH1-205ENST00000418258 CHIC2Q9UKJ5 165 aa15.09■□□□□ 0.01
PTCH1-205ENST00000418258 KDM2AQ9Y2K7 1162 aa15.08■□□□□ 0
PTCH1-205ENST00000418258 WDR43Q15061 677 aaKnown RBP eCLIP15.07■□□□□ 0
PTCH1-205ENST00000418258 TMC1Q8TDI8 760 aa15.06■□□□□ 0
PTCH1-205ENST00000418258 CHMP7Q8WUX9 453 aaPredicted RBP15.05■□□□□ 0
PTCH1-205ENST00000418258 HNRNPUQ00839 825 aaKnown RBP eCLIP15.05■□□□□ -0
PTCH1-205ENST00000418258 CDK11BP21127 795 aaKnown RBP15.05■□□□□ -0
PTCH1-205ENST00000418258 HAP1P54257 671 aaPredicted RBP15.04■□□□□ -0
PTCH1-205ENST00000418258 TSPY4P0CV99 314 aa15.04■□□□□ -0
PTCH1-205ENST00000418258 TSPY10P0CW01 314 aa15.04■□□□□ -0
PTCH1-205ENST00000418258 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.03■□□□□ -0
PTCH1-205ENST00000418258 PPP1R15AO75807 674 aaPredicted RBP15.03■□□□□ -0
PTCH1-205ENST00000418258 MYH16Q9H6N6 1097 aa15.01□□□□□ -0.01
PTCH1-205ENST00000418258 ARID4BQ4LE39 1312 aaPredicted RBP15.01□□□□□ -0.01
PTCH1-205ENST00000418258 FKBP8Q14318 412 aa15□□□□□ -0.01
PTCH1-205ENST00000418258 DDX10Q13206 875 aaKnown RBP14.98□□□□□ -0.01
PTCH1-205ENST00000418258 ARXQ96QS3 562 aa14.98□□□□□ -0.01
PTCH1-205ENST00000418258 KCNH8Q96L42 1107 aa14.96□□□□□ -0.01
PTCH1-205ENST00000418258 EIF5BO60841 1220 aaKnown RBP14.93□□□□□ -0.02
PTCH1-205ENST00000418258 MTUS2Q5JR59 1369 aa14.93□□□□□ -0.02
PTCH1-205ENST00000418258 CCDC136Q96JN2 1154 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms