Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.23■□□□□ 0.03
GPC4O75487 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GPC4O75487 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
GPC4O75487 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GPC4O75487 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
GPC4O75487 AC139749.1-202ENST00000617529 3139 ntBASIC15.23■□□□□ 0.03
GPC4O75487 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GPC4O75487 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.23■□□□□ 0.03
GPC4O75487 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.23■□□□□ 0.03
GPC4O75487 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GPC4O75487 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
GPC4O75487 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.23■□□□□ 0.03
GPC4O75487 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
GPC4O75487 FAM86LP-201ENST00000478302 853 ntBASIC15.23■□□□□ 0.03
GPC4O75487 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GPC4O75487 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.23■□□□□ 0.03
GPC4O75487 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.23■□□□□ 0.03
GPC4O75487 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GPC4O75487 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.23■□□□□ 0.03
GPC4O75487 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.23■□□□□ 0.03
GPC4O75487 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GPC4O75487 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.23■□□□□ 0.03
GPC4O75487 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
GPC4O75487 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
GPC4O75487 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
GPC4O75487 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GPC4O75487 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GPC4O75487 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GPC4O75487 AJ011931.1-201ENST00000618749 2492 ntBASIC15.23■□□□□ 0.03
GPC4O75487 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GPC4O75487 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.23■□□□□ 0.03
GPC4O75487 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GPC4O75487 AL391825.1-201ENST00000457671 1364 ntBASIC15.23■□□□□ 0.03
GPC4O75487 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
GPC4O75487 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GPC4O75487 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GPC4O75487 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.23■□□□□ 0.03
GPC4O75487 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GPC4O75487 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
GPC4O75487 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GPC4O75487 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.22■□□□□ 0.03
GPC4O75487 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
GPC4O75487 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.22■□□□□ 0.03
GPC4O75487 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC15.22■□□□□ 0.03
GPC4O75487 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GPC4O75487 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GPC4O75487 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GPC4O75487 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.22■□□□□ 0.03
GPC4O75487 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
GPC4O75487 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GPC4O75487 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.22■□□□□ 0.03
GPC4O75487 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GPC4O75487 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GPC4O75487 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC15.22■□□□□ 0.03
GPC4O75487 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
GPC4O75487 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
GPC4O75487 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GPC4O75487 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
GPC4O75487 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GPC4O75487 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GPC4O75487 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
GPC4O75487 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GPC4O75487 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
GPC4O75487 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GPC4O75487 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.22■□□□□ 0.03
GPC4O75487 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GPC4O75487 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.22■□□□□ 0.03
GPC4O75487 GAPDHP40-201ENST00000505218 1006 ntBASIC15.22■□□□□ 0.03
GPC4O75487 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.22■□□□□ 0.03
GPC4O75487 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.22■□□□□ 0.03
GPC4O75487 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.22■□□□□ 0.03
GPC4O75487 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.22■□□□□ 0.03
GPC4O75487 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.22■□□□□ 0.03
GPC4O75487 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.22■□□□□ 0.03
GPC4O75487 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GPC4O75487 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GPC4O75487 AC007191.1-201ENST00000623179 2995 ntBASIC15.22■□□□□ 0.03
GPC4O75487 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
GPC4O75487 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
GPC4O75487 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GPC4O75487 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
GPC4O75487 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GPC4O75487 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
GPC4O75487 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GPC4O75487 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.22■□□□□ 0.03
GPC4O75487 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GPC4O75487 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
GPC4O75487 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
GPC4O75487 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
GPC4O75487 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GPC4O75487 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.22■□□□□ 0.03
GPC4O75487 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GPC4O75487 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
GPC4O75487 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GPC4O75487 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GPC4O75487 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GPC4O75487 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.21■□□□□ 0.03
GPC4O75487 AC007541.1-201ENST00000570282 1469 ntBASIC15.21■□□□□ 0.03
GPC4O75487 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GPC4O75487 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms