Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HRH3Q9Y5N1 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HRH3Q9Y5N1 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
HRH3Q9Y5N1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
HRH3Q9Y5N1 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.17■□□□□ 0.98
HRH3Q9Y5N1 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HRH3Q9Y5N1 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HRH3Q9Y5N1 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
HRH3Q9Y5N1 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
HRH3Q9Y5N1 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.16■□□□□ 0.98
HRH3Q9Y5N1 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
HRH3Q9Y5N1 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HRH3Q9Y5N1 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.16■□□□□ 0.98
HRH3Q9Y5N1 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HRH3Q9Y5N1 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
HRH3Q9Y5N1 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HRH3Q9Y5N1 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HRH3Q9Y5N1 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.15■□□□□ 0.98
HRH3Q9Y5N1 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.15■□□□□ 0.98
HRH3Q9Y5N1 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.15■□□□□ 0.98
HRH3Q9Y5N1 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.15■□□□□ 0.98
HRH3Q9Y5N1 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.15■□□□□ 0.98
HRH3Q9Y5N1 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HRH3Q9Y5N1 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HRH3Q9Y5N1 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HRH3Q9Y5N1 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HRH3Q9Y5N1 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
HRH3Q9Y5N1 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HRH3Q9Y5N1 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HRH3Q9Y5N1 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.14■□□□□ 0.98
HRH3Q9Y5N1 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HRH3Q9Y5N1 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
HRH3Q9Y5N1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
HRH3Q9Y5N1 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
HRH3Q9Y5N1 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HRH3Q9Y5N1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HRH3Q9Y5N1 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
HRH3Q9Y5N1 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HRH3Q9Y5N1 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HRH3Q9Y5N1 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.13■□□□□ 0.97
HRH3Q9Y5N1 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HRH3Q9Y5N1 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HRH3Q9Y5N1 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
HRH3Q9Y5N1 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HRH3Q9Y5N1 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
HRH3Q9Y5N1 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
HRH3Q9Y5N1 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.12■□□□□ 0.97
HRH3Q9Y5N1 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HRH3Q9Y5N1 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HRH3Q9Y5N1 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.12■□□□□ 0.97
HRH3Q9Y5N1 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.12■□□□□ 0.97
HRH3Q9Y5N1 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
HRH3Q9Y5N1 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.12■□□□□ 0.97
HRH3Q9Y5N1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HRH3Q9Y5N1 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HRH3Q9Y5N1 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.12■□□□□ 0.97
HRH3Q9Y5N1 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HRH3Q9Y5N1 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HRH3Q9Y5N1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HRH3Q9Y5N1 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.12■□□□□ 0.97
HRH3Q9Y5N1 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HRH3Q9Y5N1 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HRH3Q9Y5N1 AC131274.2-201ENST00000580697 1507 ntBASIC21.11■□□□□ 0.97
HRH3Q9Y5N1 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.11■□□□□ 0.97
HRH3Q9Y5N1 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.11■□□□□ 0.97
HRH3Q9Y5N1 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.11■□□□□ 0.97
HRH3Q9Y5N1 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.11■□□□□ 0.97
HRH3Q9Y5N1 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.11■□□□□ 0.97
HRH3Q9Y5N1 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.11■□□□□ 0.97
HRH3Q9Y5N1 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.11■□□□□ 0.97
HRH3Q9Y5N1 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HRH3Q9Y5N1 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.1■□□□□ 0.97
HRH3Q9Y5N1 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.1■□□□□ 0.97
HRH3Q9Y5N1 AP003733.4-201ENST00000623785 1697 ntBASIC21.1■□□□□ 0.97
HRH3Q9Y5N1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
HRH3Q9Y5N1 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
HRH3Q9Y5N1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.1■□□□□ 0.97
HRH3Q9Y5N1 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.1■□□□□ 0.97
HRH3Q9Y5N1 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HRH3Q9Y5N1 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.09■□□□□ 0.97
HRH3Q9Y5N1 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.09■□□□□ 0.97
HRH3Q9Y5N1 AC131281.2-201ENST00000520478 145 ntBASIC21.09■□□□□ 0.97
HRH3Q9Y5N1 AC010997.5-201ENST00000609182 354 ntBASIC21.09■□□□□ 0.97
HRH3Q9Y5N1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.09■□□□□ 0.97
HRH3Q9Y5N1 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
HRH3Q9Y5N1 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.09■□□□□ 0.97
HRH3Q9Y5N1 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.09■□□□□ 0.97
HRH3Q9Y5N1 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.09■□□□□ 0.97
HRH3Q9Y5N1 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HRH3Q9Y5N1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.08■□□□□ 0.97
HRH3Q9Y5N1 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HRH3Q9Y5N1 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.08■□□□□ 0.97
HRH3Q9Y5N1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.08■□□□□ 0.97
HRH3Q9Y5N1 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HRH3Q9Y5N1 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HRH3Q9Y5N1 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HRH3Q9Y5N1 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.07■□□□□ 0.96
HRH3Q9Y5N1 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.07■□□□□ 0.96
HRH3Q9Y5N1 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HRH3Q9Y5N1 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms