Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.71■■□□□ 1.07
PCDHGB3Q9Y5G1 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGB3Q9Y5G1 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGB3Q9Y5G1 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGB3Q9Y5G1 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHGB3Q9Y5G1 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHGB3Q9Y5G1 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHGB3Q9Y5G1 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHGB3Q9Y5G1 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHGB3Q9Y5G1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDHGB3Q9Y5G1 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHGB3Q9Y5G1 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHGB3Q9Y5G1 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.7■■□□□ 1.06
PCDHGB3Q9Y5G1 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHGB3Q9Y5G1 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.69■■□□□ 1.06
PCDHGB3Q9Y5G1 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
PCDHGB3Q9Y5G1 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGB3Q9Y5G1 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGB3Q9Y5G1 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.69■■□□□ 1.06
PCDHGB3Q9Y5G1 AC103834.1-201ENST00000520383 144 ntBASIC21.69■■□□□ 1.06
PCDHGB3Q9Y5G1 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.69■■□□□ 1.06
PCDHGB3Q9Y5G1 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.69■■□□□ 1.06
PCDHGB3Q9Y5G1 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGB3Q9Y5G1 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGB3Q9Y5G1 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.69■■□□□ 1.06
PCDHGB3Q9Y5G1 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHGB3Q9Y5G1 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.69■■□□□ 1.06
PCDHGB3Q9Y5G1 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PCDHGB3Q9Y5G1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PCDHGB3Q9Y5G1 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
PCDHGB3Q9Y5G1 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.68■■□□□ 1.06
PCDHGB3Q9Y5G1 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
PCDHGB3Q9Y5G1 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
PCDHGB3Q9Y5G1 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGB3Q9Y5G1 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGB3Q9Y5G1 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGB3Q9Y5G1 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.68■■□□□ 1.06
PCDHGB3Q9Y5G1 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGB3Q9Y5G1 AC022616.5-201ENST00000518796 181 ntBASIC21.68■■□□□ 1.06
PCDHGB3Q9Y5G1 PVT1_1.1-201ENST00000615125 194 ntBASIC21.68■■□□□ 1.06
PCDHGB3Q9Y5G1 AL035685.1-201ENST00000636663 812 ntBASIC21.68■■□□□ 1.06
PCDHGB3Q9Y5G1 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.68■■□□□ 1.06
PCDHGB3Q9Y5G1 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHGB3Q9Y5G1 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGB3Q9Y5G1 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGB3Q9Y5G1 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.67■■□□□ 1.06
PCDHGB3Q9Y5G1 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
PCDHGB3Q9Y5G1 AC090877.2-201ENST00000558441 1738 ntBASIC21.67■■□□□ 1.06
PCDHGB3Q9Y5G1 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.67■■□□□ 1.06
PCDHGB3Q9Y5G1 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHGB3Q9Y5G1 AL451085.2-201ENST00000605085 799 ntBASIC21.67■■□□□ 1.06
PCDHGB3Q9Y5G1 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.67■■□□□ 1.06
PCDHGB3Q9Y5G1 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGB3Q9Y5G1 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGB3Q9Y5G1 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGB3Q9Y5G1 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGB3Q9Y5G1 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGB3Q9Y5G1 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
PCDHGB3Q9Y5G1 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGB3Q9Y5G1 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGB3Q9Y5G1 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.66■■□□□ 1.06
PCDHGB3Q9Y5G1 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.66■■□□□ 1.06
PCDHGB3Q9Y5G1 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHGB3Q9Y5G1 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.66■■□□□ 1.06
PCDHGB3Q9Y5G1 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGB3Q9Y5G1 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGB3Q9Y5G1 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGB3Q9Y5G1 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGB3Q9Y5G1 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
PCDHGB3Q9Y5G1 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.64■■□□□ 1.06
PCDHGB3Q9Y5G1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.64■■□□□ 1.06
PCDHGB3Q9Y5G1 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
PCDHGB3Q9Y5G1 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
PCDHGB3Q9Y5G1 HLA-L-211ENST00000482052 1765 ntBASIC21.64■■□□□ 1.05
PCDHGB3Q9Y5G1 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.63■■□□□ 1.05
PCDHGB3Q9Y5G1 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.63■■□□□ 1.05
PCDHGB3Q9Y5G1 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGB3Q9Y5G1 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGB3Q9Y5G1 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGB3Q9Y5G1 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGB3Q9Y5G1 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.63■■□□□ 1.05
PCDHGB3Q9Y5G1 KRT8P33-201ENST00000508125 1423 ntBASIC21.63■■□□□ 1.05
PCDHGB3Q9Y5G1 ABCB10P4-201ENST00000566803 2184 ntBASIC21.63■■□□□ 1.05
PCDHGB3Q9Y5G1 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
PCDHGB3Q9Y5G1 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGB3Q9Y5G1 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.62■■□□□ 1.05
PCDHGB3Q9Y5G1 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
PCDHGB3Q9Y5G1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGB3Q9Y5G1 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.62■■□□□ 1.05
PCDHGB3Q9Y5G1 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGB3Q9Y5G1 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGB3Q9Y5G1 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDHGB3Q9Y5G1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGB3Q9Y5G1 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
PCDHGB3Q9Y5G1 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.61■■□□□ 1.05
PCDHGB3Q9Y5G1 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGB3Q9Y5G1 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGB3Q9Y5G1 AC011551.1-201ENST00000614101 683 ntBASIC21.61■■□□□ 1.05
PCDHGB3Q9Y5G1 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGB3Q9Y5G1 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms