Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
TRIM11Q96F44 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
TRIM11Q96F44 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
TRIM11Q96F44 STK32C-205ENST00000456004 607 ntTSL 2 BASIC24.3■■□□□ 1.48
TRIM11Q96F44 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC24.3■■□□□ 1.48
TRIM11Q96F44 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TRIM11Q96F44 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.3■■□□□ 1.48
TRIM11Q96F44 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
TRIM11Q96F44 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC24.3■■□□□ 1.48
TRIM11Q96F44 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
TRIM11Q96F44 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC24.29■■□□□ 1.48
TRIM11Q96F44 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
TRIM11Q96F44 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TRIM11Q96F44 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
TRIM11Q96F44 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC24.29■■□□□ 1.48
TRIM11Q96F44 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TRIM11Q96F44 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TRIM11Q96F44 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC24.28■■□□□ 1.48
TRIM11Q96F44 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
TRIM11Q96F44 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC24.28■■□□□ 1.48
TRIM11Q96F44 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC24.28■■□□□ 1.48
TRIM11Q96F44 AC120024.1-201ENST00000562672 995 ntBASIC24.28■■□□□ 1.48
TRIM11Q96F44 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC24.28■■□□□ 1.48
TRIM11Q96F44 AC012354.3-201ENST00000623734 483 ntBASIC24.28■■□□□ 1.48
TRIM11Q96F44 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
TRIM11Q96F44 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TRIM11Q96F44 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TRIM11Q96F44 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TRIM11Q96F44 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC24.27■■□□□ 1.48
TRIM11Q96F44 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
TRIM11Q96F44 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TRIM11Q96F44 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
TRIM11Q96F44 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC24.27■■□□□ 1.48
TRIM11Q96F44 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC24.27■■□□□ 1.48
TRIM11Q96F44 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC24.27■■□□□ 1.48
TRIM11Q96F44 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TRIM11Q96F44 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TRIM11Q96F44 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TRIM11Q96F44 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
TRIM11Q96F44 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TRIM11Q96F44 DUSP8P5-201ENST00000422884 1815 ntBASIC24.26■■□□□ 1.47
TRIM11Q96F44 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC24.26■■□□□ 1.47
TRIM11Q96F44 KRT18P24-201ENST00000344739 1156 ntBASIC24.26■■□□□ 1.47
TRIM11Q96F44 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
TRIM11Q96F44 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC24.26■■□□□ 1.47
TRIM11Q96F44 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24.26■■□□□ 1.47
TRIM11Q96F44 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TRIM11Q96F44 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
TRIM11Q96F44 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC24.25■■□□□ 1.47
TRIM11Q96F44 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TRIM11Q96F44 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
TRIM11Q96F44 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC24.25■■□□□ 1.47
TRIM11Q96F44 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.25■■□□□ 1.47
TRIM11Q96F44 THA1P-201ENST00000590384 1145 ntBASIC24.25■■□□□ 1.47
TRIM11Q96F44 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TRIM11Q96F44 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TRIM11Q96F44 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TRIM11Q96F44 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
TRIM11Q96F44 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
TRIM11Q96F44 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
TRIM11Q96F44 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
TRIM11Q96F44 GUK1-208ENST00000366728 842 ntTSL 2 BASIC24.24■■□□□ 1.47
TRIM11Q96F44 BEX3-202ENST00000372634 753 ntTSL 2 BASIC24.24■■□□□ 1.47
TRIM11Q96F44 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC24.24■■□□□ 1.47
TRIM11Q96F44 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
TRIM11Q96F44 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
TRIM11Q96F44 AC010980.1-201ENST00000587192 1142 ntBASIC24.24■■□□□ 1.47
TRIM11Q96F44 PVT1_1.1-201ENST00000615125 194 ntBASIC24.24■■□□□ 1.47
TRIM11Q96F44 AC131274.2-201ENST00000580697 1507 ntBASIC24.24■■□□□ 1.47
TRIM11Q96F44 EI24-213ENST00000618552 1747 ntTSL 5 BASIC24.24■■□□□ 1.47
TRIM11Q96F44 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
TRIM11Q96F44 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC24.23■■□□□ 1.47
TRIM11Q96F44 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC24.23■■□□□ 1.47
TRIM11Q96F44 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
TRIM11Q96F44 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
TRIM11Q96F44 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
TRIM11Q96F44 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
TRIM11Q96F44 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
TRIM11Q96F44 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TRIM11Q96F44 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC24.22■■□□□ 1.47
TRIM11Q96F44 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC24.22■■□□□ 1.47
TRIM11Q96F44 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
TRIM11Q96F44 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC24.22■■□□□ 1.47
TRIM11Q96F44 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
TRIM11Q96F44 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TRIM11Q96F44 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
TRIM11Q96F44 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC24.22■■□□□ 1.47
TRIM11Q96F44 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC24.22■■□□□ 1.47
TRIM11Q96F44 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TRIM11Q96F44 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC24.21■■□□□ 1.47
TRIM11Q96F44 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TRIM11Q96F44 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
TRIM11Q96F44 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC24.21■■□□□ 1.47
TRIM11Q96F44 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC24.21■■□□□ 1.47
TRIM11Q96F44 LBH-205ENST00000407930 756 ntTSL 2 BASIC24.2■■□□□ 1.46
TRIM11Q96F44 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC24.2■■□□□ 1.46
TRIM11Q96F44 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
TRIM11Q96F44 MIR4281-201ENST00000580852 62 ntBASIC24.2■■□□□ 1.46
TRIM11Q96F44 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC24.2■■□□□ 1.46
TRIM11Q96F44 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms