Protein–RNA interactions for Protein: Q86YD5

LDLRAD3, Low-density lipoprotein receptor class A domain-containing protein 3, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3Q86YD5 AC019171.1-201ENST00000601251 1056 ntBASIC19.48■□□□□ 0.71
LDLRAD3Q86YD5 PVT1_1.1-201ENST00000615125 194 ntBASIC19.48■□□□□ 0.71
LDLRAD3Q86YD5 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LDLRAD3Q86YD5 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LDLRAD3Q86YD5 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
LDLRAD3Q86YD5 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
LDLRAD3Q86YD5 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LDLRAD3Q86YD5 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LDLRAD3Q86YD5 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LDLRAD3Q86YD5 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.47■□□□□ 0.71
LDLRAD3Q86YD5 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LDLRAD3Q86YD5 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LDLRAD3Q86YD5 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.47■□□□□ 0.71
LDLRAD3Q86YD5 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LDLRAD3Q86YD5 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LDLRAD3Q86YD5 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.47■□□□□ 0.71
LDLRAD3Q86YD5 AL451085.2-201ENST00000605085 799 ntBASIC19.47■□□□□ 0.71
LDLRAD3Q86YD5 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
LDLRAD3Q86YD5 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LDLRAD3Q86YD5 KRT8P33-201ENST00000508125 1423 ntBASIC19.47■□□□□ 0.71
LDLRAD3Q86YD5 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LDLRAD3Q86YD5 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
LDLRAD3Q86YD5 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LDLRAD3Q86YD5 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.47■□□□□ 0.71
LDLRAD3Q86YD5 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LDLRAD3Q86YD5 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LDLRAD3Q86YD5 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LDLRAD3Q86YD5 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
LDLRAD3Q86YD5 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LDLRAD3Q86YD5 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LDLRAD3Q86YD5 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LDLRAD3Q86YD5 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.46■□□□□ 0.71
LDLRAD3Q86YD5 RPS2P7-201ENST00000447334 885 ntBASIC19.46■□□□□ 0.71
LDLRAD3Q86YD5 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LDLRAD3Q86YD5 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.46■□□□□ 0.71
LDLRAD3Q86YD5 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.46■□□□□ 0.71
LDLRAD3Q86YD5 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LDLRAD3Q86YD5 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LDLRAD3Q86YD5 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
LDLRAD3Q86YD5 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LDLRAD3Q86YD5 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.45■□□□□ 0.7
LDLRAD3Q86YD5 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LDLRAD3Q86YD5 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LDLRAD3Q86YD5 AC103834.1-201ENST00000520383 144 ntBASIC19.45■□□□□ 0.7
LDLRAD3Q86YD5 AL035685.1-201ENST00000636663 812 ntBASIC19.45■□□□□ 0.7
LDLRAD3Q86YD5 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LDLRAD3Q86YD5 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.45■□□□□ 0.7
LDLRAD3Q86YD5 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LDLRAD3Q86YD5 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LDLRAD3Q86YD5 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LDLRAD3Q86YD5 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LDLRAD3Q86YD5 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LDLRAD3Q86YD5 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LDLRAD3Q86YD5 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LDLRAD3Q86YD5 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LDLRAD3Q86YD5 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LDLRAD3Q86YD5 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.44■□□□□ 0.7
LDLRAD3Q86YD5 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LDLRAD3Q86YD5 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LDLRAD3Q86YD5 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LDLRAD3Q86YD5 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LDLRAD3Q86YD5 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LDLRAD3Q86YD5 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.44■□□□□ 0.7
LDLRAD3Q86YD5 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
LDLRAD3Q86YD5 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LDLRAD3Q86YD5 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LDLRAD3Q86YD5 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.43■□□□□ 0.7
LDLRAD3Q86YD5 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LDLRAD3Q86YD5 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LDLRAD3Q86YD5 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LDLRAD3Q86YD5 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LDLRAD3Q86YD5 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
LDLRAD3Q86YD5 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LDLRAD3Q86YD5 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.43■□□□□ 0.7
LDLRAD3Q86YD5 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LDLRAD3Q86YD5 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LDLRAD3Q86YD5 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LDLRAD3Q86YD5 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LDLRAD3Q86YD5 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LDLRAD3Q86YD5 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.43■□□□□ 0.7
LDLRAD3Q86YD5 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.43■□□□□ 0.7
LDLRAD3Q86YD5 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.43■□□□□ 0.7
LDLRAD3Q86YD5 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.43■□□□□ 0.7
LDLRAD3Q86YD5 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LDLRAD3Q86YD5 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
LDLRAD3Q86YD5 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
LDLRAD3Q86YD5 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LDLRAD3Q86YD5 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LDLRAD3Q86YD5 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LDLRAD3Q86YD5 AC004812.2-201ENST00000611079 2094 ntBASIC19.42■□□□□ 0.7
LDLRAD3Q86YD5 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LDLRAD3Q86YD5 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
LDLRAD3Q86YD5 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LDLRAD3Q86YD5 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.41■□□□□ 0.7
LDLRAD3Q86YD5 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.41■□□□□ 0.7
LDLRAD3Q86YD5 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
LDLRAD3Q86YD5 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.41■□□□□ 0.7
LDLRAD3Q86YD5 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.41■□□□□ 0.7
LDLRAD3Q86YD5 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LDLRAD3Q86YD5 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms