Protein–RNA interactions for Protein: Q86XP3

DDX42, ATP-dependent RNA helicase DDX42, humanhuman

Known RBP eCLIP

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42Q86XP3 WSB1-209ENST00000581185 1900 ntTSL 2 BASIC11.24□□□□□ -0.613e-11■□□□□ 8.4
DDX42Q86XP3 WSB1-201ENST00000262394 5139 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.643e-11■□□□□ 8.4
DDX42Q86XP3 WSB1-208ENST00000581089 697 ntTSL 210.79□□□□□ -0.683e-11■□□□□ 8.4
DDX42Q86XP3 WSB1-211ENST00000582208 625 ntTSL 310.68□□□□□ -0.73e-11■□□□□ 8.4
DDX42Q86XP3 WSB1-210ENST00000581440 943 ntTSL 310.43□□□□□ -0.743e-11■□□□□ 8.4
DDX42Q86XP3 WSB1-204ENST00000467843 4187 ntTSL 1 (best)9.55□□□□□ -0.883e-11■□□□□ 8.4
DDX42Q86XP3 WSB1-216ENST00000584114 479 ntTSL 33.51□□□□□ -1.853e-11■□□□□ 8.4
DDX42Q86XP3 CDK5RAP3-236ENST00000584991 1862 ntTSL 515.91■□□□□ 0.146e-10■□□□□ 8.4
DDX42Q86XP3 CDK5RAP3-218ENST00000580391 1957 ntTSL 515.57■□□□□ 0.086e-10■□□□□ 8.4
DDX42Q86XP3 CDK5RAP3-237ENST00000585163 2519 ntTSL 1 (best)15.46■□□□□ 0.076e-10■□□□□ 8.4
DDX42Q86XP3 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.036e-10■□□□□ 8.4
DDX42Q86XP3 CDK5RAP3-219ENST00000580670 1768 ntTSL 514.24□□□□□ -0.136e-10■□□□□ 8.4
DDX42Q86XP3 CDK5RAP3-202ENST00000536708 1975 ntTSL 2 BASIC13.71□□□□□ -0.216e-10■□□□□ 8.4
DDX42Q86XP3 AC018521.1-202ENST00000641877 2655 ntBASIC13.6□□□□□ -0.236e-10■□□□□ 8.4
DDX42Q86XP3 CDK5RAP3-217ENST00000580287 2609 ntTSL 1 (best)13.46□□□□□ -0.256e-10■□□□□ 8.4
DDX42Q86XP3 CDK5RAP3-212ENST00000579175 867 ntTSL 313.43□□□□□ -0.266e-10■□□□□ 8.4
DDX42Q86XP3 CDK5RAP3-231ENST00000584063 2759 ntTSL 1 (best)12.58□□□□□ -0.396e-10■□□□□ 8.4
DDX42Q86XP3 CDK5RAP3-232ENST00000584168 2684 ntTSL 512.53□□□□□ -0.46e-10■□□□□ 8.4
DDX42Q86XP3 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC6.41□□□□□ -1.381e-323■□□□□ 8.4
DDX42Q86XP3 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.79□□□□□ -1.961e-323■□□□□ 8.4
DDX42Q86XP3 GNAS-243ENST00000484504 662 ntTSL 229.41■■■□□ 2.32e-6■□□□□ 8.3
DDX42Q86XP3 GNAS-244ENST00000485673 715 ntTSL 529.41■■■□□ 2.32e-6■□□□□ 8.3
DDX42Q86XP3 GNAS-256ENST00000603546 573 ntTSL 528.89■■■□□ 2.222e-6■□□□□ 8.3
DDX42Q86XP3 GNAS-228ENST00000469431 702 ntTSL 527.82■■■□□ 2.042e-6■□□□□ 8.3
DDX42Q86XP3 GNAS-235ENST00000478585 543 ntTSL 227.82■■■□□ 2.042e-6■□□□□ 8.3
DDX42Q86XP3 GNAS-257ENST00000604005 693 ntTSL 327.82■■■□□ 2.042e-6■□□□□ 8.3
DDX42Q86XP3 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26.84■■□□□ 1.892e-6■□□□□ 8.3
DDX42Q86XP3 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.84■■□□□ 1.892e-6■□□□□ 8.3
DDX42Q86XP3 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.84■■□□□ 1.892e-6■□□□□ 8.3
DDX42Q86XP3 GNAS-229ENST00000470512 913 ntTSL 526.64■■□□□ 1.862e-6■□□□□ 8.3
DDX42Q86XP3 GNAS-224ENST00000464960 986 ntTSL 226.55■■□□□ 1.842e-6■□□□□ 8.3
DDX42Q86XP3 GNAS-237ENST00000480232 893 ntTSL 526.43■■□□□ 1.822e-6■□□□□ 8.3
DDX42Q86XP3 GNAS-233ENST00000476935 828 ntTSL 325.15■■□□□ 1.622e-6■□□□□ 8.3
DDX42Q86XP3 GNAS-234ENST00000477931 1663 ntTSL 1 (best)24.59■■□□□ 1.532e-6■□□□□ 8.3
DDX42Q86XP3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.412e-6■□□□□ 8.3
DDX42Q86XP3 GNAS-248ENST00000488652 953 ntTSL 522.54■■□□□ 1.22e-6■□□□□ 8.3
DDX42Q86XP3 GNAS-240ENST00000481768 1903 ntTSL 1 (best)21.07■□□□□ 0.962e-6■□□□□ 8.3
DDX42Q86XP3 GNAS-238ENST00000480975 1534 ntTSL 520.59■□□□□ 0.892e-6■□□□□ 8.3
DDX42Q86XP3 GNAS-226ENST00000467321 733 ntTSL 520.03■□□□□ 0.82e-6■□□□□ 8.3
DDX42Q86XP3 GNAS-220ENST00000461152 278 ntTSL 519.46■□□□□ 0.712e-6■□□□□ 8.3
DDX42Q86XP3 GNAS-230ENST00000472183 911 ntTSL 319.15■□□□□ 0.662e-6■□□□□ 8.3
DDX42Q86XP3 GNAS-250ENST00000491348 1068 ntTSL 319.15■□□□□ 0.662e-6■□□□□ 8.3
DDX42Q86XP3 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.84■□□□□ 0.292e-6■□□□□ 8.3
DDX42Q86XP3 GNAS-223ENST00000464788 583 ntTSL 216.72■□□□□ 0.272e-6■□□□□ 8.3
DDX42Q86XP3 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.262e-6■□□□□ 8.3
DDX42Q86XP3 GNAS-249ENST00000490374 675 ntTSL 315.87■□□□□ 0.132e-6■□□□□ 8.3
DDX42Q86XP3 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.132e-6■□□□□ 8.3
DDX42Q86XP3 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC15.77■□□□□ 0.122e-6■□□□□ 8.3
DDX42Q86XP3 MSH5-206ENST00000423982 2706 ntTSL 515.76■□□□□ 0.112e-6■□□□□ 8.3
DDX42Q86XP3 GNAS-222ENST00000464624 3764 ntTSL 515.29■□□□□ 0.042e-6■□□□□ 8.3
DDX42Q86XP3 GNAS-221ENST00000462499 492 ntTSL 215.17■□□□□ 0.022e-6■□□□□ 8.3
DDX42Q86XP3 GNAS-241ENST00000482112 704 ntTSL 315.17■□□□□ 0.022e-6■□□□□ 8.3
DDX42Q86XP3 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC14.97□□□□□ -0.012e-6■□□□□ 8.3
DDX42Q86XP3 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.152e-6■□□□□ 8.3
DDX42Q86XP3 GNAS-214ENST00000371100 4029 ntTSL 5 BASIC14.01□□□□□ -0.172e-6■□□□□ 8.3
DDX42Q86XP3 GNAS-206ENST00000349036 581 ntTSL 513.91□□□□□ -0.182e-6■□□□□ 8.3
DDX42Q86XP3 GNAS-219ENST00000453292 632 ntTSL 513.78□□□□□ -0.22e-6■□□□□ 8.3
DDX42Q86XP3 MSH5-209ENST00000450148 1000 ntTSL 513.06□□□□□ -0.322e-6■□□□□ 8.3
DDX42Q86XP3 GNAS-209ENST00000371081 730 ntTSL 2 BASIC12.57□□□□□ -0.42e-6■□□□□ 8.3
DDX42Q86XP3 GNAS-252ENST00000493744 812 ntTSL 212.44□□□□□ -0.422e-6■□□□□ 8.3
DDX42Q86XP3 GNAS-239ENST00000481039 756 ntTSL 511.99□□□□□ -0.492e-6■□□□□ 8.3
DDX42Q86XP3 GNAS-205ENST00000338783 641 ntTSL 311.97□□□□□ -0.492e-6■□□□□ 8.3
DDX42Q86XP3 GNAS-217ENST00000423897 736 ntTSL 311.97□□□□□ -0.492e-6■□□□□ 8.3
DDX42Q86XP3 GNAS-247ENST00000488546 897 ntTSL 511.62□□□□□ -0.552e-6■□□□□ 8.3
DDX42Q86XP3 GNAS-208ENST00000371075 2551 ntTSL 1 (best) BASIC11.61□□□□□ -0.552e-6■□□□□ 8.3
DDX42Q86XP3 MSH5-212ENST00000467319 688 ntTSL 211.59□□□□□ -0.552e-6■□□□□ 8.3
DDX42Q86XP3 MSH5-SAPCD1-207ENST00000493662 3991 ntAPPRIS P5 TSL 1 (best) BASIC11.46□□□□□ -0.572e-6■□□□□ 8.3
DDX42Q86XP3 GNAS-216ENST00000419558 729 ntTSL 311.44□□□□□ -0.582e-6■□□□□ 8.3
DDX42Q86XP3 MSH5-211ENST00000463144 2296 ntTSL 510.86□□□□□ -0.672e-6■□□□□ 8.3
DDX42Q86XP3 GNAS-204ENST00000313949 2578 ntTSL 1 (best) BASIC10.85□□□□□ -0.672e-6■□□□□ 8.3
DDX42Q86XP3 MSH5-213ENST00000468136 690 ntTSL 210.62□□□□□ -0.712e-6■□□□□ 8.3
DDX42Q86XP3 GNAS-218ENST00000450130 595 ntTSL 59.73□□□□□ -0.852e-6■□□□□ 8.3
DDX42Q86XP3 MSH5-205ENST00000395853 2704 ntTSL 2 BASIC9.43□□□□□ -0.92e-6■□□□□ 8.3
DDX42Q86XP3 GNAS-225ENST00000467227 543 ntTSL 38.92□□□□□ -0.982e-6■□□□□ 8.3
DDX42Q86XP3 GNAS-227ENST00000468895 583 ntTSL 38.84□□□□□ -0.992e-6■□□□□ 8.3
DDX42Q86XP3 GNAS-251ENST00000492907 790 ntTSL 38.84□□□□□ -0.992e-6■□□□□ 8.3
DDX42Q86XP3 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC6.59□□□□□ -1.352e-6■□□□□ 8.3
DDX42Q86XP3 TRIM25-208ENST00000574234 471 ntTSL 25.92□□□□□ -1.462e-6■□□□□ 8.3
DDX42Q86XP3 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.25□□□□□ -1.572e-6■□□□□ 8.3
DDX42Q86XP3 NEAT1-202ENST00000501122 22743 ntBASIC5.29□□□□□ -1.561e-30■□□□□ 8.3
DDX42Q86XP3 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.314e-13■□□□□ 8.3
DDX42Q86XP3 XPO1-206ENST00000428210 6776 ntTSL 214□□□□□ -0.174e-13■□□□□ 8.3
DDX42Q86XP3 XPO1-203ENST00000406957 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.924e-13■□□□□ 8.3
DDX42Q86XP3 XPO1-212ENST00000457483 488 ntTSL 46.88□□□□□ -1.314e-13■□□□□ 8.3
DDX42Q86XP3 XPO1-209ENST00000443240 565 ntTSL 46.22□□□□□ -1.414e-13■□□□□ 8.3
DDX42Q86XP3 XPO1-207ENST00000436018 318 ntTSL 45.06□□□□□ -1.64e-13■□□□□ 8.3
DDX42Q86XP3 XPO1-220ENST00000481214 720 ntTSL 23.52□□□□□ -1.854e-13■□□□□ 8.3
DDX42Q86XP3 CDYL-207ENST00000472453 1764 ntTSL 1 (best)26.74■■□□□ 1.873e-7■□□□□ 8.2
DDX42Q86XP3 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.563e-7■□□□□ 8.2
DDX42Q86XP3 GATA2-204ENST00000489987 1433 ntTSL 221.61■■□□□ 1.053e-7■□□□□ 8.2
DDX42Q86XP3 C17orf62-227ENST00000582725 1127 ntTSL 521.46■■□□□ 1.034e-6■□□□□ 8.2
DDX42Q86XP3 DDX39A-207ENST00000588542 1297 ntTSL 321.18■□□□□ 0.984e-6■□□□□ 8.2
DDX42Q86XP3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.984e-6■□□□□ 8.2
DDX42Q86XP3 MTA1-220ENST00000552286 1943 ntTSL 220.83■□□□□ 0.934e-6■□□□□ 8.2
DDX42Q86XP3 C17orf62-208ENST00000577696 656 ntTSL 420.68■□□□□ 0.94e-6■□□□□ 8.2
DDX42Q86XP3 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.94e-6■□□□□ 8.2
DDX42Q86XP3 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.59■□□□□ 0.894e-6■□□□□ 8.2
DDX42Q86XP3 DDX39A-204ENST00000586558 1127 ntTSL 220.08■□□□□ 0.814e-6■□□□□ 8.2
DDX42Q86XP3 DDX39A-214ENST00000590556 575 ntTSL 220.02■□□□□ 0.84e-6■□□□□ 8.2
DDX42Q86XP3 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.76■□□□□ 0.753e-7■□□□□ 8.2
Retrieved 100 of 2,477 protein–RNA pairs in 14.5 ms