Protein–RNA interactions for Protein: Q86UQ8

NFE4, Transcription factor NF-E4, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4Q86UQ8 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NFE4Q86UQ8 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
NFE4Q86UQ8 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NFE4Q86UQ8 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NFE4Q86UQ8 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC16.32■□□□□ 0.2
NFE4Q86UQ8 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
NFE4Q86UQ8 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NFE4Q86UQ8 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC16.32■□□□□ 0.2
NFE4Q86UQ8 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NFE4Q86UQ8 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NFE4Q86UQ8 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC16.31■□□□□ 0.2
NFE4Q86UQ8 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NFE4Q86UQ8 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NFE4Q86UQ8 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NFE4Q86UQ8 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NFE4Q86UQ8 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC16.31■□□□□ 0.2
NFE4Q86UQ8 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NFE4Q86UQ8 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
NFE4Q86UQ8 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
NFE4Q86UQ8 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NFE4Q86UQ8 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
NFE4Q86UQ8 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NFE4Q86UQ8 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NFE4Q86UQ8 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
NFE4Q86UQ8 NFE2L3P1-201ENST00000588207 1959 ntBASIC16.3■□□□□ 0.2
NFE4Q86UQ8 AL117328.2-201ENST00000624617 1940 ntBASIC16.3■□□□□ 0.2
NFE4Q86UQ8 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NFE4Q86UQ8 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NFE4Q86UQ8 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC16.3■□□□□ 0.2
NFE4Q86UQ8 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NFE4Q86UQ8 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NFE4Q86UQ8 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NFE4Q86UQ8 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NFE4Q86UQ8 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NFE4Q86UQ8 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NFE4Q86UQ8 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NFE4Q86UQ8 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC16.29■□□□□ 0.2
NFE4Q86UQ8 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NFE4Q86UQ8 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
NFE4Q86UQ8 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC16.29■□□□□ 0.2
NFE4Q86UQ8 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NFE4Q86UQ8 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NFE4Q86UQ8 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
NFE4Q86UQ8 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NFE4Q86UQ8 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NFE4Q86UQ8 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NFE4Q86UQ8 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NFE4Q86UQ8 IDNK-203ENST00000405990 629 ntTSL 2 BASIC16.28■□□□□ 0.2
NFE4Q86UQ8 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC16.28■□□□□ 0.2
NFE4Q86UQ8 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NFE4Q86UQ8 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NFE4Q86UQ8 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC16.28■□□□□ 0.2
NFE4Q86UQ8 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NFE4Q86UQ8 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NFE4Q86UQ8 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC16.27■□□□□ 0.2
NFE4Q86UQ8 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NFE4Q86UQ8 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
NFE4Q86UQ8 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NFE4Q86UQ8 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NFE4Q86UQ8 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC16.27■□□□□ 0.2
NFE4Q86UQ8 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NFE4Q86UQ8 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NFE4Q86UQ8 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
NFE4Q86UQ8 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
NFE4Q86UQ8 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
NFE4Q86UQ8 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NFE4Q86UQ8 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NFE4Q86UQ8 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NFE4Q86UQ8 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
NFE4Q86UQ8 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
NFE4Q86UQ8 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NFE4Q86UQ8 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
NFE4Q86UQ8 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NFE4Q86UQ8 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NFE4Q86UQ8 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC16.26■□□□□ 0.19
NFE4Q86UQ8 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC16.26■□□□□ 0.19
NFE4Q86UQ8 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC16.26■□□□□ 0.19
NFE4Q86UQ8 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
NFE4Q86UQ8 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NFE4Q86UQ8 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NFE4Q86UQ8 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC16.26■□□□□ 0.19
NFE4Q86UQ8 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NFE4Q86UQ8 SLC25A24-204ENST00000569674 2357 ntBASIC16.26■□□□□ 0.19
NFE4Q86UQ8 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC16.26■□□□□ 0.19
NFE4Q86UQ8 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC16.26■□□□□ 0.19
NFE4Q86UQ8 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NFE4Q86UQ8 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC16.25■□□□□ 0.19
NFE4Q86UQ8 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NFE4Q86UQ8 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC16.25■□□□□ 0.19
NFE4Q86UQ8 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
NFE4Q86UQ8 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC16.25■□□□□ 0.19
NFE4Q86UQ8 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
NFE4Q86UQ8 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC16.25■□□□□ 0.19
NFE4Q86UQ8 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NFE4Q86UQ8 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NFE4Q86UQ8 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NFE4Q86UQ8 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
NFE4Q86UQ8 ABCB10P4-201ENST00000566803 2184 ntBASIC16.24■□□□□ 0.19
NFE4Q86UQ8 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NFE4Q86UQ8 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms