Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
IRX4P78413 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
IRX4P78413 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.71■■□□□ 1.39
IRX4P78413 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
IRX4P78413 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.71■■□□□ 1.39
IRX4P78413 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.71■■□□□ 1.39
IRX4P78413 AC110285.6-201ENST00000617652 491 ntBASIC23.71■■□□□ 1.39
IRX4P78413 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.71■■□□□ 1.39
IRX4P78413 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
IRX4P78413 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.7■■□□□ 1.39
IRX4P78413 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.7■■□□□ 1.38
IRX4P78413 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.7■■□□□ 1.38
IRX4P78413 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
IRX4P78413 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.7■■□□□ 1.38
IRX4P78413 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
IRX4P78413 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
IRX4P78413 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.69■■□□□ 1.38
IRX4P78413 AC005837.3-201ENST00000612163 286 ntBASIC23.69■■□□□ 1.38
IRX4P78413 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.69■■□□□ 1.38
IRX4P78413 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
IRX4P78413 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
IRX4P78413 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
IRX4P78413 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
IRX4P78413 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
IRX4P78413 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
IRX4P78413 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.68■■□□□ 1.38
IRX4P78413 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
IRX4P78413 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.68■■□□□ 1.38
IRX4P78413 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.68■■□□□ 1.38
IRX4P78413 AL117332.1-201ENST00000622628 974 ntBASIC23.68■■□□□ 1.38
IRX4P78413 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
IRX4P78413 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
IRX4P78413 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
IRX4P78413 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.68■■□□□ 1.38
IRX4P78413 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
IRX4P78413 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
IRX4P78413 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
IRX4P78413 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
IRX4P78413 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.68■■□□□ 1.38
IRX4P78413 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
IRX4P78413 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
IRX4P78413 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
IRX4P78413 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
IRX4P78413 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
IRX4P78413 LINC01124-201ENST00000409786 2117 ntBASIC23.67■■□□□ 1.38
IRX4P78413 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.67■■□□□ 1.38
IRX4P78413 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.67■■□□□ 1.38
IRX4P78413 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
IRX4P78413 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
IRX4P78413 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
IRX4P78413 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
IRX4P78413 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.66■■□□□ 1.38
IRX4P78413 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
IRX4P78413 MIR3621-201ENST00000580529 85 ntBASIC23.66■■□□□ 1.38
IRX4P78413 AC010997.5-201ENST00000609182 354 ntBASIC23.66■■□□□ 1.38
IRX4P78413 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.66■■□□□ 1.38
IRX4P78413 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.65■■□□□ 1.38
IRX4P78413 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
IRX4P78413 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.65■■□□□ 1.38
IRX4P78413 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
IRX4P78413 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
IRX4P78413 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.65■■□□□ 1.38
IRX4P78413 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
IRX4P78413 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
IRX4P78413 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
IRX4P78413 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
IRX4P78413 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
IRX4P78413 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.65■■□□□ 1.38
IRX4P78413 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
IRX4P78413 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
IRX4P78413 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.64■■□□□ 1.38
IRX4P78413 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
IRX4P78413 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
IRX4P78413 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
IRX4P78413 AC096631.2-201ENST00000436136 790 ntBASIC23.64■■□□□ 1.37
IRX4P78413 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
IRX4P78413 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.64■■□□□ 1.37
IRX4P78413 AC097639.1-201ENST00000565519 1891 ntBASIC23.64■■□□□ 1.37
IRX4P78413 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
IRX4P78413 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
IRX4P78413 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.63■■□□□ 1.37
IRX4P78413 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
IRX4P78413 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.63■■□□□ 1.37
IRX4P78413 MIR4281-201ENST00000580852 62 ntBASIC23.63■■□□□ 1.37
IRX4P78413 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
IRX4P78413 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
IRX4P78413 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
IRX4P78413 SLC6A10P-202ENST00000431994 2058 ntBASIC23.63■■□□□ 1.37
IRX4P78413 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
IRX4P78413 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
IRX4P78413 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
IRX4P78413 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.62■■□□□ 1.37
IRX4P78413 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
IRX4P78413 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.62■■□□□ 1.37
IRX4P78413 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
IRX4P78413 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.62■■□□□ 1.37
IRX4P78413 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.62■■□□□ 1.37
IRX4P78413 MIR6724-1-201ENST00000616420 92 ntBASIC23.62■■□□□ 1.37
IRX4P78413 MIR6724-2-201ENST00000616483 92 ntBASIC23.62■■□□□ 1.37
IRX4P78413 MIR6724-4-201ENST00000617390 92 ntBASIC23.62■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms