Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SEC61A1P61619 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SEC61A1P61619 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SEC61A1P61619 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SEC61A1P61619 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.92■□□□□ 0.78
SEC61A1P61619 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SEC61A1P61619 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SEC61A1P61619 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SEC61A1P61619 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SEC61A1P61619 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SEC61A1P61619 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SEC61A1P61619 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SEC61A1P61619 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SEC61A1P61619 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
SEC61A1P61619 YBX1P4-201ENST00000392794 808 ntBASIC19.91■□□□□ 0.78
SEC61A1P61619 AL451085.2-201ENST00000605085 799 ntBASIC19.91■□□□□ 0.78
SEC61A1P61619 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SEC61A1P61619 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SEC61A1P61619 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SEC61A1P61619 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SEC61A1P61619 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SEC61A1P61619 AP003733.4-201ENST00000623785 1697 ntBASIC19.91■□□□□ 0.78
SEC61A1P61619 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
SEC61A1P61619 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SEC61A1P61619 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SEC61A1P61619 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SEC61A1P61619 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SEC61A1P61619 LONRF2P2-201ENST00000439212 571 ntBASIC19.9■□□□□ 0.78
SEC61A1P61619 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.9■□□□□ 0.78
SEC61A1P61619 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SEC61A1P61619 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SEC61A1P61619 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.9■□□□□ 0.78
SEC61A1P61619 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SEC61A1P61619 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SEC61A1P61619 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SEC61A1P61619 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.9■□□□□ 0.78
SEC61A1P61619 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SEC61A1P61619 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
SEC61A1P61619 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
SEC61A1P61619 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
SEC61A1P61619 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SEC61A1P61619 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SEC61A1P61619 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SEC61A1P61619 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.89■□□□□ 0.77
SEC61A1P61619 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SEC61A1P61619 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SEC61A1P61619 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SEC61A1P61619 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
SEC61A1P61619 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.89■□□□□ 0.77
SEC61A1P61619 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.89■□□□□ 0.77
SEC61A1P61619 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
SEC61A1P61619 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SEC61A1P61619 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SEC61A1P61619 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SEC61A1P61619 MIR4508-201ENST00000584178 70 ntBASIC19.88■□□□□ 0.77
SEC61A1P61619 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SEC61A1P61619 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
SEC61A1P61619 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.88■□□□□ 0.77
SEC61A1P61619 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
SEC61A1P61619 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SEC61A1P61619 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.87■□□□□ 0.77
SEC61A1P61619 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.87■□□□□ 0.77
SEC61A1P61619 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SEC61A1P61619 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SEC61A1P61619 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SEC61A1P61619 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.87■□□□□ 0.77
SEC61A1P61619 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SEC61A1P61619 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SEC61A1P61619 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
SEC61A1P61619 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SEC61A1P61619 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SEC61A1P61619 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SEC61A1P61619 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SEC61A1P61619 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SEC61A1P61619 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.86■□□□□ 0.77
SEC61A1P61619 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SEC61A1P61619 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.86■□□□□ 0.77
SEC61A1P61619 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.86■□□□□ 0.77
SEC61A1P61619 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
SEC61A1P61619 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SEC61A1P61619 AC019171.1-201ENST00000601251 1056 ntBASIC19.86■□□□□ 0.77
SEC61A1P61619 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SEC61A1P61619 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SEC61A1P61619 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SEC61A1P61619 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SEC61A1P61619 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SEC61A1P61619 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SEC61A1P61619 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
SEC61A1P61619 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SEC61A1P61619 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SEC61A1P61619 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.85■□□□□ 0.77
SEC61A1P61619 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SEC61A1P61619 KRT18P10-201ENST00000388836 1287 ntBASIC19.85■□□□□ 0.77
SEC61A1P61619 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SEC61A1P61619 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SEC61A1P61619 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SEC61A1P61619 AC103724.3-201ENST00000564481 992 ntBASIC19.85■□□□□ 0.77
SEC61A1P61619 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SEC61A1P61619 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.85■□□□□ 0.77
SEC61A1P61619 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms