Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CHMP24386 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
CHMP24386 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHMP24386 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CHMP24386 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CHMP24386 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
CHMP24386 AL592295.1-201ENST00000400984 884 ntBASIC21.42■■□□□ 1.02
CHMP24386 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.42■■□□□ 1.02
CHMP24386 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
CHMP24386 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHMP24386 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHMP24386 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHMP24386 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHMP24386 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHMP24386 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHMP24386 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.41■■□□□ 1.02
CHMP24386 AC103724.3-201ENST00000564481 992 ntBASIC21.41■■□□□ 1.02
CHMP24386 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.41■■□□□ 1.02
CHMP24386 MIR6089-201ENST00000616698 64 ntBASIC21.41■■□□□ 1.02
CHMP24386 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
CHMP24386 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHMP24386 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CHMP24386 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CHMP24386 ABCB10P4-201ENST00000566803 2184 ntBASIC21.4■■□□□ 1.02
CHMP24386 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CHMP24386 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.4■■□□□ 1.02
CHMP24386 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHMP24386 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.4■■□□□ 1.02
CHMP24386 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHMP24386 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
CHMP24386 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.4■■□□□ 1.02
CHMP24386 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.4■■□□□ 1.02
CHMP24386 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.39■■□□□ 1.02
CHMP24386 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.39■■□□□ 1.02
CHMP24386 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CHMP24386 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHMP24386 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
CHMP24386 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
CHMP24386 AC079834.2-201ENST00000609776 1949 ntBASIC21.39■■□□□ 1.01
CHMP24386 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHMP24386 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.39■■□□□ 1.01
CHMP24386 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CHMP24386 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
CHMP24386 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHMP24386 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHMP24386 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
CHMP24386 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CHMP24386 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.38■■□□□ 1.01
CHMP24386 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHMP24386 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHMP24386 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHMP24386 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHMP24386 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHMP24386 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHMP24386 AL031848.2-201ENST00000607670 837 ntBASIC21.37■■□□□ 1.01
CHMP24386 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.37■■□□□ 1.01
CHMP24386 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.37■■□□□ 1.01
CHMP24386 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.37■■□□□ 1.01
CHMP24386 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHMP24386 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CHMP24386 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CHMP24386 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CHMP24386 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CHMP24386 AL451085.2-201ENST00000605085 799 ntBASIC21.36■■□□□ 1.01
CHMP24386 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.36■■□□□ 1.01
CHMP24386 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CHMP24386 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CHMP24386 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CHMP24386 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHMP24386 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.35■■□□□ 1.01
CHMP24386 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHMP24386 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHMP24386 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHMP24386 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.35■■□□□ 1.01
CHMP24386 KRT18P24-201ENST00000344739 1156 ntBASIC21.35■■□□□ 1.01
CHMP24386 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CHMP24386 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.35■■□□□ 1.01
CHMP24386 AL035685.1-201ENST00000636663 812 ntBASIC21.35■■□□□ 1.01
CHMP24386 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHMP24386 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHMP24386 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CHMP24386 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHMP24386 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHMP24386 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.33■■□□□ 1.01
CHMP24386 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.33■■□□□ 1
CHMP24386 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.32■■□□□ 1
CHMP24386 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHMP24386 FOXO3B-201ENST00000395675 1928 ntBASIC21.32■■□□□ 1
CHMP24386 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHMP24386 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.32■■□□□ 1
CHMP24386 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHMP24386 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHMP24386 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.32■■□□□ 1
CHMP24386 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.31■■□□□ 1
CHMP24386 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
CHMP24386 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHMP24386 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.3■■□□□ 1
CHMP24386 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.3■■□□□ 1
CHMP24386 THA1P-201ENST00000590384 1145 ntBASIC21.3■■□□□ 1
CHMP24386 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms