Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.14■□□□□ 0.97
NR4A1P22736 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NR4A1P22736 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NR4A1P22736 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
NR4A1P22736 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NR4A1P22736 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
NR4A1P22736 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
NR4A1P22736 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NR4A1P22736 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.14■□□□□ 0.97
NR4A1P22736 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NR4A1P22736 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NR4A1P22736 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NR4A1P22736 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
NR4A1P22736 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NR4A1P22736 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.13■□□□□ 0.97
NR4A1P22736 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.13■□□□□ 0.97
NR4A1P22736 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.13■□□□□ 0.97
NR4A1P22736 U85056.1-201ENST00000616429 682 ntBASIC21.13■□□□□ 0.97
NR4A1P22736 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NR4A1P22736 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
NR4A1P22736 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NR4A1P22736 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NR4A1P22736 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NR4A1P22736 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
NR4A1P22736 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.12■□□□□ 0.97
NR4A1P22736 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NR4A1P22736 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
NR4A1P22736 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
NR4A1P22736 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NR4A1P22736 AC093536.1-201ENST00000569153 554 ntBASIC21.12■□□□□ 0.97
NR4A1P22736 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
NR4A1P22736 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.12■□□□□ 0.97
NR4A1P22736 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
NR4A1P22736 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
NR4A1P22736 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
NR4A1P22736 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
NR4A1P22736 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.11■□□□□ 0.97
NR4A1P22736 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.11■□□□□ 0.97
NR4A1P22736 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NR4A1P22736 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
NR4A1P22736 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NR4A1P22736 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NR4A1P22736 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NR4A1P22736 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NR4A1P22736 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
NR4A1P22736 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.1■□□□□ 0.97
NR4A1P22736 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.1■□□□□ 0.97
NR4A1P22736 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NR4A1P22736 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.1■□□□□ 0.97
NR4A1P22736 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.1■□□□□ 0.97
NR4A1P22736 AC026202.3-201ENST00000600805 1127 ntBASIC21.1■□□□□ 0.97
NR4A1P22736 AC133552.2-201ENST00000619106 1032 ntBASIC21.1■□□□□ 0.97
NR4A1P22736 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.1■□□□□ 0.97
NR4A1P22736 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NR4A1P22736 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.09■□□□□ 0.97
NR4A1P22736 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
NR4A1P22736 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NR4A1P22736 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
NR4A1P22736 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NR4A1P22736 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
NR4A1P22736 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NR4A1P22736 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NR4A1P22736 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
NR4A1P22736 AC009831.1-201ENST00000580420 1582 ntBASIC21.09■□□□□ 0.97
NR4A1P22736 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.09■□□□□ 0.97
NR4A1P22736 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.08■□□□□ 0.97
NR4A1P22736 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NR4A1P22736 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.08■□□□□ 0.97
NR4A1P22736 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NR4A1P22736 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NR4A1P22736 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.08■□□□□ 0.97
NR4A1P22736 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NR4A1P22736 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.08■□□□□ 0.96
NR4A1P22736 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
NR4A1P22736 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
NR4A1P22736 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
NR4A1P22736 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
NR4A1P22736 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
NR4A1P22736 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NR4A1P22736 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NR4A1P22736 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NR4A1P22736 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NR4A1P22736 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.07■□□□□ 0.96
NR4A1P22736 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.07■□□□□ 0.96
NR4A1P22736 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.06■□□□□ 0.96
NR4A1P22736 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NR4A1P22736 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.06■□□□□ 0.96
NR4A1P22736 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NR4A1P22736 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.06■□□□□ 0.96
NR4A1P22736 RAP2CP1-202ENST00000605179 643 ntBASIC21.06■□□□□ 0.96
NR4A1P22736 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NR4A1P22736 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NR4A1P22736 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NR4A1P22736 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.06■□□□□ 0.96
NR4A1P22736 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NR4A1P22736 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.06■□□□□ 0.96
NR4A1P22736 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
NR4A1P22736 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
NR4A1P22736 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NR4A1P22736 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms