Protein–RNA interactions for Protein: O76009

KRT33A, Keratin, type I cuticular Ha3-I, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT33AO76009 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.71■□□□□ 0.91
KRT33AO76009 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.71■□□□□ 0.91
KRT33AO76009 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
KRT33AO76009 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KRT33AO76009 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.7■□□□□ 0.9
KRT33AO76009 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.7■□□□□ 0.9
KRT33AO76009 AC103724.3-201ENST00000564481 992 ntBASIC20.7■□□□□ 0.9
KRT33AO76009 AC011551.1-201ENST00000614101 683 ntBASIC20.7■□□□□ 0.9
KRT33AO76009 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
KRT33AO76009 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KRT33AO76009 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.7■□□□□ 0.9
KRT33AO76009 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.7■□□□□ 0.9
KRT33AO76009 AC090877.2-201ENST00000558441 1738 ntBASIC20.7■□□□□ 0.9
KRT33AO76009 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.69■□□□□ 0.9
KRT33AO76009 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
KRT33AO76009 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KRT33AO76009 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT33AO76009 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
KRT33AO76009 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.69■□□□□ 0.9
KRT33AO76009 KRT18P24-201ENST00000344739 1156 ntBASIC20.69■□□□□ 0.9
KRT33AO76009 AC120024.1-201ENST00000562672 995 ntBASIC20.69■□□□□ 0.9
KRT33AO76009 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.69■□□□□ 0.9
KRT33AO76009 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT33AO76009 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT33AO76009 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KRT33AO76009 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT33AO76009 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT33AO76009 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KRT33AO76009 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.69■□□□□ 0.9
KRT33AO76009 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
KRT33AO76009 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
KRT33AO76009 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT33AO76009 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
KRT33AO76009 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT33AO76009 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.68■□□□□ 0.9
KRT33AO76009 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.68■□□□□ 0.9
KRT33AO76009 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT33AO76009 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT33AO76009 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
KRT33AO76009 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT33AO76009 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT33AO76009 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
KRT33AO76009 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
KRT33AO76009 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.68■□□□□ 0.9
KRT33AO76009 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT33AO76009 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT33AO76009 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.67■□□□□ 0.9
KRT33AO76009 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.67■□□□□ 0.9
KRT33AO76009 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.67■□□□□ 0.9
KRT33AO76009 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT33AO76009 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.67■□□□□ 0.9
KRT33AO76009 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
KRT33AO76009 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT33AO76009 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT33AO76009 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.66■□□□□ 0.9
KRT33AO76009 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT33AO76009 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KRT33AO76009 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT33AO76009 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KRT33AO76009 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KRT33AO76009 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT33AO76009 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.65■□□□□ 0.9
KRT33AO76009 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.65■□□□□ 0.9
KRT33AO76009 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT33AO76009 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KRT33AO76009 LINC01124-201ENST00000409786 2117 ntBASIC20.65■□□□□ 0.9
KRT33AO76009 AC068473.5-201ENST00000616428 2072 ntBASIC20.65■□□□□ 0.9
KRT33AO76009 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KRT33AO76009 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
KRT33AO76009 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
KRT33AO76009 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
KRT33AO76009 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT33AO76009 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT33AO76009 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT33AO76009 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.64■□□□□ 0.89
KRT33AO76009 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
KRT33AO76009 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KRT33AO76009 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT33AO76009 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT33AO76009 AP003733.4-201ENST00000623785 1697 ntBASIC20.64■□□□□ 0.89
KRT33AO76009 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.64■□□□□ 0.89
KRT33AO76009 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KRT33AO76009 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.63■□□□□ 0.89
KRT33AO76009 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KRT33AO76009 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KRT33AO76009 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KRT33AO76009 MIR6089-201ENST00000616698 64 ntBASIC20.63■□□□□ 0.89
KRT33AO76009 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
KRT33AO76009 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.63■□□□□ 0.89
KRT33AO76009 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT33AO76009 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KRT33AO76009 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
KRT33AO76009 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
KRT33AO76009 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KRT33AO76009 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT33AO76009 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.62■□□□□ 0.89
KRT33AO76009 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.62■□□□□ 0.89
KRT33AO76009 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.62■□□□□ 0.89
KRT33AO76009 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KRT33AO76009 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms