Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
AP3D1O14617 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
AP3D1O14617 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
AP3D1O14617 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
AP3D1O14617 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.35■■□□□ 1.01
AP3D1O14617 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.35■■□□□ 1.01
AP3D1O14617 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.35■■□□□ 1.01
AP3D1O14617 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
AP3D1O14617 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
AP3D1O14617 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.35■■□□□ 1.01
AP3D1O14617 AC139795.1-202ENST00000500444 432 ntBASIC21.35■■□□□ 1.01
AP3D1O14617 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
AP3D1O14617 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
AP3D1O14617 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
AP3D1O14617 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.35■■□□□ 1.01
AP3D1O14617 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
AP3D1O14617 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
AP3D1O14617 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
AP3D1O14617 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
AP3D1O14617 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
AP3D1O14617 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.34■■□□□ 1.01
AP3D1O14617 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
AP3D1O14617 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
AP3D1O14617 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
AP3D1O14617 ABCB10P4-201ENST00000566803 2184 ntBASIC21.34■■□□□ 1.01
AP3D1O14617 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
AP3D1O14617 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.33■■□□□ 1.01
AP3D1O14617 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
AP3D1O14617 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
AP3D1O14617 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
AP3D1O14617 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
AP3D1O14617 AL592295.1-201ENST00000400984 884 ntBASIC21.33■■□□□ 1.01
AP3D1O14617 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
AP3D1O14617 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
AP3D1O14617 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
AP3D1O14617 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
AP3D1O14617 AC068473.5-201ENST00000616428 2072 ntBASIC21.33■■□□□ 1
AP3D1O14617 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
AP3D1O14617 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.32■■□□□ 1
AP3D1O14617 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
AP3D1O14617 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.32■■□□□ 1
AP3D1O14617 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
AP3D1O14617 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
AP3D1O14617 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.32■■□□□ 1
AP3D1O14617 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.32■■□□□ 1
AP3D1O14617 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
AP3D1O14617 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.32■■□□□ 1
AP3D1O14617 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
AP3D1O14617 AC079834.2-201ENST00000609776 1949 ntBASIC21.31■■□□□ 1
AP3D1O14617 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
AP3D1O14617 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
AP3D1O14617 TSPY13P-201ENST00000338964 914 ntBASIC21.31■■□□□ 1
AP3D1O14617 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
AP3D1O14617 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
AP3D1O14617 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.31■■□□□ 1
AP3D1O14617 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.31■■□□□ 1
AP3D1O14617 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
AP3D1O14617 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
AP3D1O14617 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
AP3D1O14617 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
AP3D1O14617 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
AP3D1O14617 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
AP3D1O14617 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.3■■□□□ 1
AP3D1O14617 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.3■■□□□ 1
AP3D1O14617 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
AP3D1O14617 BHLHE23-202ENST00000612929 1109 ntBASIC21.3■■□□□ 1
AP3D1O14617 AC012354.3-201ENST00000623734 483 ntBASIC21.3■■□□□ 1
AP3D1O14617 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
AP3D1O14617 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
AP3D1O14617 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.3■■□□□ 1
AP3D1O14617 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
AP3D1O14617 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.29■■□□□ 1
AP3D1O14617 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.29■■□□□ 1
AP3D1O14617 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.29■■□□□ 1
AP3D1O14617 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.29■■□□□ 1
AP3D1O14617 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.29■■□□□ 1
AP3D1O14617 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.29■■□□□ 1
AP3D1O14617 AC090877.2-201ENST00000558441 1738 ntBASIC21.29■■□□□ 1
AP3D1O14617 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.29■■□□□ 1
AP3D1O14617 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
AP3D1O14617 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.29■■□□□ 1
AP3D1O14617 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.29■■□□□ 1
AP3D1O14617 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
AP3D1O14617 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
AP3D1O14617 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
AP3D1O14617 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.28■■□□□ 1
AP3D1O14617 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.28■■□□□ 1
AP3D1O14617 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.28■■□□□ 1
AP3D1O14617 AL033527.3-201ENST00000566366 1196 ntBASIC21.28■■□□□ 1
AP3D1O14617 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.28■■□□□ 1
AP3D1O14617 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
AP3D1O14617 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.28■■□□□ 1
AP3D1O14617 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
AP3D1O14617 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.27■■□□□ 1
AP3D1O14617 PVT1_1.1-201ENST00000615125 194 ntBASIC21.27■■□□□ 1
AP3D1O14617 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
AP3D1O14617 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
AP3D1O14617 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
AP3D1O14617 AC010980.1-201ENST00000587192 1142 ntBASIC21.26■□□□□ 0.99
AP3D1O14617 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms