Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
UPK1AO00322 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
UPK1AO00322 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.83■■□□□ 1.09
UPK1AO00322 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
UPK1AO00322 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
UPK1AO00322 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
UPK1AO00322 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.83■■□□□ 1.09
UPK1AO00322 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
UPK1AO00322 BHLHE23-202ENST00000612929 1109 ntBASIC21.83■■□□□ 1.09
UPK1AO00322 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
UPK1AO00322 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
UPK1AO00322 CLDN5-201ENST00000403084 2357 ntBASIC21.83■■□□□ 1.08
UPK1AO00322 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.83■■□□□ 1.08
UPK1AO00322 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.83■■□□□ 1.08
UPK1AO00322 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.83■■□□□ 1.08
UPK1AO00322 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
UPK1AO00322 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.82■■□□□ 1.08
UPK1AO00322 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
UPK1AO00322 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
UPK1AO00322 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
UPK1AO00322 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
UPK1AO00322 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.82■■□□□ 1.08
UPK1AO00322 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
UPK1AO00322 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
UPK1AO00322 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.82■■□□□ 1.08
UPK1AO00322 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
UPK1AO00322 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
UPK1AO00322 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
UPK1AO00322 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
UPK1AO00322 HLA-L-211ENST00000482052 1765 ntBASIC21.82■■□□□ 1.08
UPK1AO00322 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
UPK1AO00322 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.81■■□□□ 1.08
UPK1AO00322 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
UPK1AO00322 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
UPK1AO00322 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
UPK1AO00322 AL033527.3-201ENST00000566366 1196 ntBASIC21.81■■□□□ 1.08
UPK1AO00322 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
UPK1AO00322 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
UPK1AO00322 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
UPK1AO00322 AC090877.2-201ENST00000558441 1738 ntBASIC21.8■■□□□ 1.08
UPK1AO00322 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.8■■□□□ 1.08
UPK1AO00322 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
UPK1AO00322 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
UPK1AO00322 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
UPK1AO00322 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
UPK1AO00322 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
UPK1AO00322 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.79■■□□□ 1.08
UPK1AO00322 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
UPK1AO00322 AC074183.2-201ENST00000623112 922 ntBASIC21.79■■□□□ 1.08
UPK1AO00322 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.79■■□□□ 1.08
UPK1AO00322 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
UPK1AO00322 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
UPK1AO00322 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
UPK1AO00322 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.78■■□□□ 1.08
UPK1AO00322 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.78■■□□□ 1.08
UPK1AO00322 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
UPK1AO00322 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.78■■□□□ 1.08
UPK1AO00322 PVT1_1.1-201ENST00000615125 194 ntBASIC21.78■■□□□ 1.08
UPK1AO00322 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.78■■□□□ 1.08
UPK1AO00322 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.78■■□□□ 1.08
UPK1AO00322 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
UPK1AO00322 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
UPK1AO00322 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
UPK1AO00322 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
UPK1AO00322 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
UPK1AO00322 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
UPK1AO00322 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
UPK1AO00322 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.77■■□□□ 1.08
UPK1AO00322 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
UPK1AO00322 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
UPK1AO00322 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
UPK1AO00322 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
UPK1AO00322 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
UPK1AO00322 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
UPK1AO00322 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.76■■□□□ 1.07
UPK1AO00322 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.76■■□□□ 1.07
UPK1AO00322 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.76■■□□□ 1.07
UPK1AO00322 AC010980.1-201ENST00000587192 1142 ntBASIC21.76■■□□□ 1.07
UPK1AO00322 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.76■■□□□ 1.07
UPK1AO00322 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
UPK1AO00322 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
UPK1AO00322 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
UPK1AO00322 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.75■■□□□ 1.07
UPK1AO00322 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
UPK1AO00322 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.75■■□□□ 1.07
UPK1AO00322 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.75■■□□□ 1.07
UPK1AO00322 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UPK1AO00322 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UPK1AO00322 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.75■■□□□ 1.07
UPK1AO00322 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
UPK1AO00322 AC022616.5-201ENST00000518796 181 ntBASIC21.75■■□□□ 1.07
UPK1AO00322 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UPK1AO00322 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UPK1AO00322 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.74■■□□□ 1.07
UPK1AO00322 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.74■■□□□ 1.07
UPK1AO00322 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.74■■□□□ 1.07
UPK1AO00322 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
UPK1AO00322 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
UPK1AO00322 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
UPK1AO00322 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms