Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SH3D21A4FU49 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.25■□□□□ 0.99
SH3D21A4FU49 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SH3D21A4FU49 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.25■□□□□ 0.99
SH3D21A4FU49 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SH3D21A4FU49 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SH3D21A4FU49 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SH3D21A4FU49 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.24■□□□□ 0.99
SH3D21A4FU49 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
SH3D21A4FU49 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SH3D21A4FU49 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SH3D21A4FU49 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SH3D21A4FU49 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SH3D21A4FU49 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.24■□□□□ 0.99
SH3D21A4FU49 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SH3D21A4FU49 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SH3D21A4FU49 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.24■□□□□ 0.99
SH3D21A4FU49 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SH3D21A4FU49 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SH3D21A4FU49 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
SH3D21A4FU49 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SH3D21A4FU49 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SH3D21A4FU49 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.23■□□□□ 0.99
SH3D21A4FU49 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SH3D21A4FU49 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
SH3D21A4FU49 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
SH3D21A4FU49 ABCB10P4-201ENST00000566803 2184 ntBASIC21.23■□□□□ 0.99
SH3D21A4FU49 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.22■□□□□ 0.99
SH3D21A4FU49 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SH3D21A4FU49 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SH3D21A4FU49 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SH3D21A4FU49 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.22■□□□□ 0.99
SH3D21A4FU49 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
SH3D21A4FU49 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.22■□□□□ 0.99
SH3D21A4FU49 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SH3D21A4FU49 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SH3D21A4FU49 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SH3D21A4FU49 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SH3D21A4FU49 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
SH3D21A4FU49 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SH3D21A4FU49 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SH3D21A4FU49 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SH3D21A4FU49 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.2■□□□□ 0.98
SH3D21A4FU49 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.2■□□□□ 0.98
SH3D21A4FU49 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SH3D21A4FU49 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SH3D21A4FU49 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SH3D21A4FU49 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SH3D21A4FU49 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SH3D21A4FU49 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SH3D21A4FU49 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SH3D21A4FU49 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SH3D21A4FU49 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.19■□□□□ 0.98
SH3D21A4FU49 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.19■□□□□ 0.98
SH3D21A4FU49 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.19■□□□□ 0.98
SH3D21A4FU49 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
SH3D21A4FU49 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SH3D21A4FU49 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.18■□□□□ 0.98
SH3D21A4FU49 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SH3D21A4FU49 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
SH3D21A4FU49 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SH3D21A4FU49 AC087393.1-201ENST00000582896 145 ntBASIC21.18■□□□□ 0.98
SH3D21A4FU49 AL031848.2-201ENST00000607670 837 ntBASIC21.18■□□□□ 0.98
SH3D21A4FU49 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SH3D21A4FU49 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SH3D21A4FU49 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SH3D21A4FU49 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SH3D21A4FU49 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.17■□□□□ 0.98
SH3D21A4FU49 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.17■□□□□ 0.98
SH3D21A4FU49 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
SH3D21A4FU49 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SH3D21A4FU49 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.17■□□□□ 0.98
SH3D21A4FU49 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SH3D21A4FU49 AC103724.3-201ENST00000564481 992 ntBASIC21.17■□□□□ 0.98
SH3D21A4FU49 AC019171.1-201ENST00000601251 1056 ntBASIC21.17■□□□□ 0.98
SH3D21A4FU49 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.17■□□□□ 0.98
SH3D21A4FU49 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SH3D21A4FU49 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SH3D21A4FU49 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SH3D21A4FU49 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SH3D21A4FU49 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SH3D21A4FU49 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SH3D21A4FU49 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SH3D21A4FU49 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.16■□□□□ 0.98
SH3D21A4FU49 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SH3D21A4FU49 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SH3D21A4FU49 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SH3D21A4FU49 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.15■□□□□ 0.98
SH3D21A4FU49 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SH3D21A4FU49 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SH3D21A4FU49 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SH3D21A4FU49 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.15■□□□□ 0.98
SH3D21A4FU49 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SH3D21A4FU49 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.15■□□□□ 0.98
SH3D21A4FU49 RPS2P7-201ENST00000447334 885 ntBASIC21.15■□□□□ 0.98
SH3D21A4FU49 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SH3D21A4FU49 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SH3D21A4FU49 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SH3D21A4FU49 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SH3D21A4FU49 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms