Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC16.44■□□□□ 0.22
TRGV4A0A0C4DH28 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRGV4A0A0C4DH28 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRGV4A0A0C4DH28 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRGV4A0A0C4DH28 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC16.43■□□□□ 0.22
TRGV4A0A0C4DH28 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRGV4A0A0C4DH28 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC16.43■□□□□ 0.22
TRGV4A0A0C4DH28 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC16.43■□□□□ 0.22
TRGV4A0A0C4DH28 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRGV4A0A0C4DH28 PKM-204ENST00000449901 2526 ntTSL 2 BASIC16.43■□□□□ 0.22
TRGV4A0A0C4DH28 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRGV4A0A0C4DH28 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRGV4A0A0C4DH28 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRGV4A0A0C4DH28 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
TRGV4A0A0C4DH28 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC16.42■□□□□ 0.22
TRGV4A0A0C4DH28 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRGV4A0A0C4DH28 BEX3-202ENST00000372634 753 ntTSL 2 BASIC16.42■□□□□ 0.22
TRGV4A0A0C4DH28 IDNK-201ENST00000376417 511 ntTSL 5 BASIC16.42■□□□□ 0.22
TRGV4A0A0C4DH28 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRGV4A0A0C4DH28 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC16.42■□□□□ 0.22
TRGV4A0A0C4DH28 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRGV4A0A0C4DH28 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRGV4A0A0C4DH28 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
TRGV4A0A0C4DH28 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRGV4A0A0C4DH28 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TRGV4A0A0C4DH28 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRGV4A0A0C4DH28 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRGV4A0A0C4DH28 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC16.41■□□□□ 0.22
TRGV4A0A0C4DH28 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC16.41■□□□□ 0.22
TRGV4A0A0C4DH28 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC16.41■□□□□ 0.22
TRGV4A0A0C4DH28 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC16.41■□□□□ 0.22
TRGV4A0A0C4DH28 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRGV4A0A0C4DH28 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC16.41■□□□□ 0.22
TRGV4A0A0C4DH28 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRGV4A0A0C4DH28 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRGV4A0A0C4DH28 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRGV4A0A0C4DH28 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRGV4A0A0C4DH28 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRGV4A0A0C4DH28 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRGV4A0A0C4DH28 YBX1P4-201ENST00000392794 808 ntBASIC16.4■□□□□ 0.22
TRGV4A0A0C4DH28 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC16.4■□□□□ 0.22
TRGV4A0A0C4DH28 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC16.4■□□□□ 0.22
TRGV4A0A0C4DH28 THA1P-201ENST00000590384 1145 ntBASIC16.4■□□□□ 0.22
TRGV4A0A0C4DH28 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRGV4A0A0C4DH28 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRGV4A0A0C4DH28 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
TRGV4A0A0C4DH28 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC16.4■□□□□ 0.22
TRGV4A0A0C4DH28 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRGV4A0A0C4DH28 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TRGV4A0A0C4DH28 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRGV4A0A0C4DH28 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRGV4A0A0C4DH28 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRGV4A0A0C4DH28 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRGV4A0A0C4DH28 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRGV4A0A0C4DH28 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRGV4A0A0C4DH28 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRGV4A0A0C4DH28 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TRGV4A0A0C4DH28 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC16.39■□□□□ 0.21
TRGV4A0A0C4DH28 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC16.39■□□□□ 0.21
TRGV4A0A0C4DH28 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRGV4A0A0C4DH28 GAK-223ENST00000628912 497 ntTSL 5 BASIC16.39■□□□□ 0.21
TRGV4A0A0C4DH28 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC16.39■□□□□ 0.21
TRGV4A0A0C4DH28 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC16.39■□□□□ 0.21
TRGV4A0A0C4DH28 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRGV4A0A0C4DH28 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TRGV4A0A0C4DH28 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
TRGV4A0A0C4DH28 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRGV4A0A0C4DH28 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC16.38■□□□□ 0.21
TRGV4A0A0C4DH28 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRGV4A0A0C4DH28 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRGV4A0A0C4DH28 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRGV4A0A0C4DH28 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TRGV4A0A0C4DH28 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
TRGV4A0A0C4DH28 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRGV4A0A0C4DH28 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRGV4A0A0C4DH28 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRGV4A0A0C4DH28 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRGV4A0A0C4DH28 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC16.38■□□□□ 0.21
TRGV4A0A0C4DH28 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC16.38■□□□□ 0.21
TRGV4A0A0C4DH28 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC16.38■□□□□ 0.21
TRGV4A0A0C4DH28 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRGV4A0A0C4DH28 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRGV4A0A0C4DH28 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRGV4A0A0C4DH28 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRGV4A0A0C4DH28 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRGV4A0A0C4DH28 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRGV4A0A0C4DH28 KRT8P33-201ENST00000508125 1423 ntBASIC16.37■□□□□ 0.21
TRGV4A0A0C4DH28 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRGV4A0A0C4DH28 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TRGV4A0A0C4DH28 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRGV4A0A0C4DH28 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRGV4A0A0C4DH28 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC16.37■□□□□ 0.21
TRGV4A0A0C4DH28 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC16.37■□□□□ 0.21
TRGV4A0A0C4DH28 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC16.37■□□□□ 0.21
TRGV4A0A0C4DH28 PVT1_1.1-201ENST00000615125 194 ntBASIC16.37■□□□□ 0.21
TRGV4A0A0C4DH28 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRGV4A0A0C4DH28 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRGV4A0A0C4DH28 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRGV4A0A0C4DH28 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
TRGV4A0A0C4DH28 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms