Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HPS1Q92902 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.02□□□□□ -0.16
HPS1Q92902 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC14.02□□□□□ -0.16
HPS1Q92902 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC14.02□□□□□ -0.16
HPS1Q92902 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
HPS1Q92902 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
HPS1Q92902 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.02□□□□□ -0.16
HPS1Q92902 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HPS1Q92902 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.02□□□□□ -0.16
HPS1Q92902 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.02□□□□□ -0.16
HPS1Q92902 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HPS1Q92902 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.02□□□□□ -0.16
HPS1Q92902 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
HPS1Q92902 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HPS1Q92902 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.02□□□□□ -0.17
HPS1Q92902 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HPS1Q92902 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.02□□□□□ -0.17
HPS1Q92902 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HPS1Q92902 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.02□□□□□ -0.17
HPS1Q92902 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.02□□□□□ -0.17
HPS1Q92902 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.02□□□□□ -0.17
HPS1Q92902 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.02□□□□□ -0.17
HPS1Q92902 AC010422.1-201ENST00000414548 543 ntTSL 2 BASIC14.02□□□□□ -0.17
HPS1Q92902 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.02□□□□□ -0.17
HPS1Q92902 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HPS1Q92902 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.02□□□□□ -0.17
HPS1Q92902 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.02□□□□□ -0.17
HPS1Q92902 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.02□□□□□ -0.17
HPS1Q92902 IGHV3-62-201ENST00000520057 340 ntBASIC14.02□□□□□ -0.17
HPS1Q92902 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.02□□□□□ -0.17
HPS1Q92902 AP001059.3-201ENST00000619053 235 ntBASIC14.02□□□□□ -0.17
HPS1Q92902 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.02□□□□□ -0.17
HPS1Q92902 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC14.02□□□□□ -0.17
HPS1Q92902 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HPS1Q92902 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.02□□□□□ -0.17
HPS1Q92902 AC105206.1-202ENST00000314927 2368 ntBASIC14.02□□□□□ -0.17
HPS1Q92902 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HPS1Q92902 AC105250.1-201ENST00000509378 2057 ntBASIC14.02□□□□□ -0.17
HPS1Q92902 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
HPS1Q92902 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
HPS1Q92902 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.02□□□□□ -0.17
HPS1Q92902 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
HPS1Q92902 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HPS1Q92902 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HPS1Q92902 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HPS1Q92902 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
HPS1Q92902 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HPS1Q92902 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
HPS1Q92902 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HPS1Q92902 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.01□□□□□ -0.17
HPS1Q92902 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.01□□□□□ -0.17
HPS1Q92902 AC040160.2-201ENST00000623816 1675 ntBASIC14.01□□□□□ -0.17
HPS1Q92902 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
HPS1Q92902 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
HPS1Q92902 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
HPS1Q92902 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HPS1Q92902 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
HPS1Q92902 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.01□□□□□ -0.17
HPS1Q92902 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HPS1Q92902 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HPS1Q92902 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
HPS1Q92902 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HPS1Q92902 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
HPS1Q92902 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.01□□□□□ -0.17
HPS1Q92902 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HPS1Q92902 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
HPS1Q92902 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC14.01□□□□□ -0.17
HPS1Q92902 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HPS1Q92902 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HPS1Q92902 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HPS1Q92902 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.01□□□□□ -0.17
HPS1Q92902 HSFY1P1-201ENST00000423928 1178 ntBASIC14.01□□□□□ -0.17
HPS1Q92902 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.01□□□□□ -0.17
HPS1Q92902 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.01□□□□□ -0.17
HPS1Q92902 BCRP1-201ENST00000444246 691 ntBASIC14.01□□□□□ -0.17
HPS1Q92902 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.01□□□□□ -0.17
HPS1Q92902 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
HPS1Q92902 AC243562.1-201ENST00000560672 389 ntBASIC14.01□□□□□ -0.17
HPS1Q92902 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.01□□□□□ -0.17
HPS1Q92902 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HPS1Q92902 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HPS1Q92902 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HPS1Q92902 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HPS1Q92902 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HPS1Q92902 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.01□□□□□ -0.17
HPS1Q92902 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HPS1Q92902 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC14.01□□□□□ -0.17
HPS1Q92902 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HPS1Q92902 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
HPS1Q92902 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.01□□□□□ -0.17
HPS1Q92902 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HPS1Q92902 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC14.01□□□□□ -0.17
HPS1Q92902 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HPS1Q92902 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
HPS1Q92902 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
HPS1Q92902 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14□□□□□ -0.17
HPS1Q92902 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
HPS1Q92902 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HPS1Q92902 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HPS1Q92902 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 162.1 ms