Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.66□□□□□ -0.22
BBS1Q8NFJ9 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
BBS1Q8NFJ9 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
BBS1Q8NFJ9 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
BBS1Q8NFJ9 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
BBS1Q8NFJ9 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.66□□□□□ -0.22
BBS1Q8NFJ9 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
BBS1Q8NFJ9 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.66□□□□□ -0.22
BBS1Q8NFJ9 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BBS1Q8NFJ9 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
BBS1Q8NFJ9 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
BBS1Q8NFJ9 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.66□□□□□ -0.22
BBS1Q8NFJ9 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.66□□□□□ -0.22
BBS1Q8NFJ9 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.66□□□□□ -0.22
BBS1Q8NFJ9 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
BBS1Q8NFJ9 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.66□□□□□ -0.22
BBS1Q8NFJ9 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC13.66□□□□□ -0.22
BBS1Q8NFJ9 AC010336.2-201ENST00000564226 506 ntBASIC13.66□□□□□ -0.22
BBS1Q8NFJ9 AC051619.7-201ENST00000568314 623 ntBASIC13.66□□□□□ -0.22
BBS1Q8NFJ9 AC010327.4-202ENST00000591484 748 ntBASIC13.66□□□□□ -0.22
BBS1Q8NFJ9 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.66□□□□□ -0.22
BBS1Q8NFJ9 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BBS1Q8NFJ9 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
BBS1Q8NFJ9 TEX28P1-201ENST00000613479 1221 ntBASIC13.66□□□□□ -0.22
BBS1Q8NFJ9 TEX28P2-201ENST00000617764 1221 ntBASIC13.66□□□□□ -0.22
BBS1Q8NFJ9 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.66□□□□□ -0.22
BBS1Q8NFJ9 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BBS1Q8NFJ9 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BBS1Q8NFJ9 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
BBS1Q8NFJ9 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
BBS1Q8NFJ9 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.66□□□□□ -0.22
BBS1Q8NFJ9 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BBS1Q8NFJ9 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
BBS1Q8NFJ9 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BBS1Q8NFJ9 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
BBS1Q8NFJ9 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BBS1Q8NFJ9 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
BBS1Q8NFJ9 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BBS1Q8NFJ9 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.66□□□□□ -0.22
BBS1Q8NFJ9 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
BBS1Q8NFJ9 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
BBS1Q8NFJ9 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
BBS1Q8NFJ9 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
BBS1Q8NFJ9 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
BBS1Q8NFJ9 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.65□□□□□ -0.22
BBS1Q8NFJ9 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.65□□□□□ -0.22
BBS1Q8NFJ9 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
BBS1Q8NFJ9 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.65□□□□□ -0.22
BBS1Q8NFJ9 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.65□□□□□ -0.22
BBS1Q8NFJ9 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.65□□□□□ -0.22
BBS1Q8NFJ9 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
BBS1Q8NFJ9 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
BBS1Q8NFJ9 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
BBS1Q8NFJ9 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
BBS1Q8NFJ9 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
BBS1Q8NFJ9 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.65□□□□□ -0.22
BBS1Q8NFJ9 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.65□□□□□ -0.22
BBS1Q8NFJ9 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
BBS1Q8NFJ9 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
BBS1Q8NFJ9 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.65□□□□□ -0.22
BBS1Q8NFJ9 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
BBS1Q8NFJ9 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.65□□□□□ -0.22
BBS1Q8NFJ9 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
BBS1Q8NFJ9 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
BBS1Q8NFJ9 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
BBS1Q8NFJ9 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
BBS1Q8NFJ9 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.65□□□□□ -0.22
BBS1Q8NFJ9 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
BBS1Q8NFJ9 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
BBS1Q8NFJ9 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
BBS1Q8NFJ9 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.65□□□□□ -0.22
BBS1Q8NFJ9 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
BBS1Q8NFJ9 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
BBS1Q8NFJ9 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
BBS1Q8NFJ9 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.65□□□□□ -0.22
BBS1Q8NFJ9 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.65□□□□□ -0.22
BBS1Q8NFJ9 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
BBS1Q8NFJ9 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
BBS1Q8NFJ9 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
BBS1Q8NFJ9 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
BBS1Q8NFJ9 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
BBS1Q8NFJ9 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
BBS1Q8NFJ9 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
BBS1Q8NFJ9 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
BBS1Q8NFJ9 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms