Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC12.41□□□□□ -0.42
DEFA4P12838 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
DEFA4P12838 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
DEFA4P12838 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.41□□□□□ -0.42
DEFA4P12838 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC12.41□□□□□ -0.42
DEFA4P12838 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
DEFA4P12838 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.41□□□□□ -0.42
DEFA4P12838 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
DEFA4P12838 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
DEFA4P12838 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.4□□□□□ -0.42
DEFA4P12838 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
DEFA4P12838 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
DEFA4P12838 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC12.4□□□□□ -0.42
DEFA4P12838 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
DEFA4P12838 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
DEFA4P12838 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.4□□□□□ -0.42
DEFA4P12838 AC006504.5-208ENST00000588784 2401 ntBASIC12.4□□□□□ -0.42
DEFA4P12838 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
DEFA4P12838 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
DEFA4P12838 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
DEFA4P12838 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
DEFA4P12838 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
DEFA4P12838 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
DEFA4P12838 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
DEFA4P12838 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC12.4□□□□□ -0.42
DEFA4P12838 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
DEFA4P12838 TSEN15P1-201ENST00000423257 515 ntBASIC12.4□□□□□ -0.42
DEFA4P12838 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.4□□□□□ -0.42
DEFA4P12838 DNAJB3-202ENST00000449667 1266 ntBASIC12.4□□□□□ -0.42
DEFA4P12838 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC12.4□□□□□ -0.42
DEFA4P12838 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC12.4□□□□□ -0.42
DEFA4P12838 AC069262.1-201ENST00000539058 672 ntBASIC12.4□□□□□ -0.42
DEFA4P12838 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
DEFA4P12838 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.4□□□□□ -0.42
DEFA4P12838 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC12.4□□□□□ -0.42
DEFA4P12838 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
DEFA4P12838 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC12.4□□□□□ -0.42
DEFA4P12838 AL691403.2-201ENST00000618460 490 ntBASIC12.4□□□□□ -0.42
DEFA4P12838 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC12.4□□□□□ -0.42
DEFA4P12838 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
DEFA4P12838 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
DEFA4P12838 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
DEFA4P12838 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC12.4□□□□□ -0.42
DEFA4P12838 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
DEFA4P12838 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
DEFA4P12838 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
DEFA4P12838 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
DEFA4P12838 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
DEFA4P12838 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
DEFA4P12838 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
DEFA4P12838 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
DEFA4P12838 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
DEFA4P12838 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
DEFA4P12838 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
DEFA4P12838 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
DEFA4P12838 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
DEFA4P12838 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
DEFA4P12838 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
DEFA4P12838 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.4□□□□□ -0.43
DEFA4P12838 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12.39□□□□□ -0.43
DEFA4P12838 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.39□□□□□ -0.43
DEFA4P12838 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
DEFA4P12838 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.39□□□□□ -0.43
DEFA4P12838 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
DEFA4P12838 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
DEFA4P12838 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
DEFA4P12838 ZBED1P1-201ENST00000502364 1930 ntBASIC12.39□□□□□ -0.43
DEFA4P12838 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
DEFA4P12838 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
DEFA4P12838 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
DEFA4P12838 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
DEFA4P12838 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
DEFA4P12838 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
DEFA4P12838 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
DEFA4P12838 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.39□□□□□ -0.43
DEFA4P12838 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
DEFA4P12838 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
DEFA4P12838 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
DEFA4P12838 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
DEFA4P12838 NME4-207ENST00000450036 985 ntTSL 3 BASIC12.39□□□□□ -0.43
DEFA4P12838 AC125807.1-201ENST00000483097 614 ntBASIC12.39□□□□□ -0.43
DEFA4P12838 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC12.39□□□□□ -0.43
DEFA4P12838 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC12.39□□□□□ -0.43
DEFA4P12838 AL512356.2-201ENST00000546955 174 ntBASIC12.39□□□□□ -0.43
DEFA4P12838 VPS29-207ENST00000549970 818 ntTSL 3 BASIC12.39□□□□□ -0.43
DEFA4P12838 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC12.39□□□□□ -0.43
DEFA4P12838 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC12.39□□□□□ -0.43
DEFA4P12838 AC097359.3-201ENST00000603982 1210 ntBASIC12.39□□□□□ -0.43
DEFA4P12838 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC12.39□□□□□ -0.43
DEFA4P12838 AL133215.2-201ENST00000609242 977 ntBASIC12.39□□□□□ -0.43
DEFA4P12838 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC12.39□□□□□ -0.43
DEFA4P12838 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
DEFA4P12838 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
DEFA4P12838 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
DEFA4P12838 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
DEFA4P12838 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
DEFA4P12838 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
DEFA4P12838 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC12.39□□□□□ -0.43
DEFA4P12838 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.39□□□□□ -0.43
DEFA4P12838 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms