Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
HMGN1P05114 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.78□□□□□ -0.2
HMGN1P05114 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
HMGN1P05114 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
HMGN1P05114 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
HMGN1P05114 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.2
HMGN1P05114 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
HMGN1P05114 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.2
HMGN1P05114 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HMGN1P05114 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
HMGN1P05114 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.77□□□□□ -0.2
HMGN1P05114 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
HMGN1P05114 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HMGN1P05114 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
HMGN1P05114 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
HMGN1P05114 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HMGN1P05114 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HMGN1P05114 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HMGN1P05114 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HMGN1P05114 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HMGN1P05114 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HMGN1P05114 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HMGN1P05114 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HMGN1P05114 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HMGN1P05114 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HMGN1P05114 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HMGN1P05114 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC13.77□□□□□ -0.21
HMGN1P05114 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.77□□□□□ -0.21
HMGN1P05114 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.77□□□□□ -0.21
HMGN1P05114 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
HMGN1P05114 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.77□□□□□ -0.21
HMGN1P05114 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HMGN1P05114 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HMGN1P05114 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.77□□□□□ -0.21
HMGN1P05114 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
HMGN1P05114 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.77□□□□□ -0.21
HMGN1P05114 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.77□□□□□ -0.21
HMGN1P05114 AL359881.3-201ENST00000602640 1721 ntBASIC13.77□□□□□ -0.21
HMGN1P05114 LINC01115-203ENST00000606068 577 ntBASIC13.77□□□□□ -0.21
HMGN1P05114 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.77□□□□□ -0.21
HMGN1P05114 AP001059.3-201ENST00000619053 235 ntBASIC13.77□□□□□ -0.21
HMGN1P05114 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
HMGN1P05114 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
HMGN1P05114 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HMGN1P05114 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
HMGN1P05114 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
HMGN1P05114 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.77□□□□□ -0.21
HMGN1P05114 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
HMGN1P05114 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HMGN1P05114 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMGN1P05114 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMGN1P05114 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMGN1P05114 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.76□□□□□ -0.21
HMGN1P05114 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.76□□□□□ -0.21
HMGN1P05114 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
HMGN1P05114 AC092135.3-201ENST00000624151 1846 ntBASIC13.76□□□□□ -0.21
HMGN1P05114 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMGN1P05114 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HMGN1P05114 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HMGN1P05114 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMGN1P05114 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
HMGN1P05114 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
HMGN1P05114 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMGN1P05114 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HMGN1P05114 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.76□□□□□ -0.21
HMGN1P05114 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
HMGN1P05114 AC018665.1-201ENST00000622927 1362 ntBASIC13.76□□□□□ -0.21
HMGN1P05114 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
HMGN1P05114 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMGN1P05114 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
HMGN1P05114 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
HMGN1P05114 MIR574-201ENST00000385209 96 ntBASIC13.76□□□□□ -0.21
HMGN1P05114 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.76□□□□□ -0.21
HMGN1P05114 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.76□□□□□ -0.21
HMGN1P05114 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.76□□□□□ -0.21
HMGN1P05114 YBX1P5-201ENST00000509441 847 ntBASIC13.76□□□□□ -0.21
HMGN1P05114 POLD2P1-201ENST00000511220 997 ntBASIC13.76□□□□□ -0.21
HMGN1P05114 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.76□□□□□ -0.21
HMGN1P05114 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HMGN1P05114 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.76□□□□□ -0.21
HMGN1P05114 MIR4469-201ENST00000583919 79 ntBASIC13.76□□□□□ -0.21
HMGN1P05114 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMGN1P05114 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.76□□□□□ -0.21
HMGN1P05114 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.76□□□□□ -0.21
HMGN1P05114 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMGN1P05114 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMGN1P05114 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
HMGN1P05114 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HMGN1P05114 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMGN1P05114 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
HMGN1P05114 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.76□□□□□ -0.21
HMGN1P05114 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMGN1P05114 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.76□□□□□ -0.21
HMGN1P05114 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMGN1P05114 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMGN1P05114 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HMGN1P05114 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
HMGN1P05114 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HMGN1P05114 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.75□□□□□ -0.21
HMGN1P05114 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms