Protein–RNA interactions for Protein: A6NEF3

GOLGA6L4, Golgin subfamily A member 6-like protein 4, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GOLGA6L4A6NEF3 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC17.56■□□□□ 0.4
GOLGA6L4A6NEF3 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GOLGA6L4A6NEF3 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
GOLGA6L4A6NEF3 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
GOLGA6L4A6NEF3 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GOLGA6L4A6NEF3 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GOLGA6L4A6NEF3 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
GOLGA6L4A6NEF3 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GOLGA6L4A6NEF3 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.56■□□□□ 0.4
GOLGA6L4A6NEF3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.56■□□□□ 0.4
GOLGA6L4A6NEF3 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.56■□□□□ 0.4
GOLGA6L4A6NEF3 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.56■□□□□ 0.4
GOLGA6L4A6NEF3 AC025048.3-201ENST00000590609 569 ntBASIC17.56■□□□□ 0.4
GOLGA6L4A6NEF3 AC005702.4-201ENST00000618393 416 ntBASIC17.56■□□□□ 0.4
GOLGA6L4A6NEF3 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
GOLGA6L4A6NEF3 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.56■□□□□ 0.4
GOLGA6L4A6NEF3 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
GOLGA6L4A6NEF3 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GOLGA6L4A6NEF3 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GOLGA6L4A6NEF3 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
GOLGA6L4A6NEF3 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC17.56■□□□□ 0.4
GOLGA6L4A6NEF3 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
GOLGA6L4A6NEF3 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC17.56■□□□□ 0.4
GOLGA6L4A6NEF3 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GOLGA6L4A6NEF3 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC17.56■□□□□ 0.4
GOLGA6L4A6NEF3 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
GOLGA6L4A6NEF3 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC17.56■□□□□ 0.4
GOLGA6L4A6NEF3 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GOLGA6L4A6NEF3 OS9-204ENST00000389146 2091 ntTSL 2 BASIC17.56■□□□□ 0.4
GOLGA6L4A6NEF3 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
GOLGA6L4A6NEF3 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
GOLGA6L4A6NEF3 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
GOLGA6L4A6NEF3 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
GOLGA6L4A6NEF3 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.55■□□□□ 0.4
GOLGA6L4A6NEF3 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
GOLGA6L4A6NEF3 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GOLGA6L4A6NEF3 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
GOLGA6L4A6NEF3 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.55■□□□□ 0.4
GOLGA6L4A6NEF3 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GOLGA6L4A6NEF3 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GOLGA6L4A6NEF3 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GOLGA6L4A6NEF3 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
GOLGA6L4A6NEF3 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
GOLGA6L4A6NEF3 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GOLGA6L4A6NEF3 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
GOLGA6L4A6NEF3 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GOLGA6L4A6NEF3 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
GOLGA6L4A6NEF3 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GOLGA6L4A6NEF3 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.55■□□□□ 0.4
GOLGA6L4A6NEF3 AL121723.1-201ENST00000445194 1519 ntBASIC17.55■□□□□ 0.4
GOLGA6L4A6NEF3 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.55■□□□□ 0.4
GOLGA6L4A6NEF3 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC17.55■□□□□ 0.4
GOLGA6L4A6NEF3 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GOLGA6L4A6NEF3 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GOLGA6L4A6NEF3 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
GOLGA6L4A6NEF3 AC005840.4-201ENST00000541242 2494 ntBASIC17.55■□□□□ 0.4
GOLGA6L4A6NEF3 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.55■□□□□ 0.4
GOLGA6L4A6NEF3 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GOLGA6L4A6NEF3 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
GOLGA6L4A6NEF3 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC17.54■□□□□ 0.4
GOLGA6L4A6NEF3 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GOLGA6L4A6NEF3 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GOLGA6L4A6NEF3 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GOLGA6L4A6NEF3 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GOLGA6L4A6NEF3 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GOLGA6L4A6NEF3 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.54■□□□□ 0.4
GOLGA6L4A6NEF3 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GOLGA6L4A6NEF3 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.54■□□□□ 0.4
GOLGA6L4A6NEF3 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC17.54■□□□□ 0.4
GOLGA6L4A6NEF3 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC17.54■□□□□ 0.4
GOLGA6L4A6NEF3 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
GOLGA6L4A6NEF3 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
GOLGA6L4A6NEF3 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GOLGA6L4A6NEF3 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
GOLGA6L4A6NEF3 AC104457.1-201ENST00000401024 814 ntBASIC17.54■□□□□ 0.4
GOLGA6L4A6NEF3 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
GOLGA6L4A6NEF3 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GOLGA6L4A6NEF3 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.54■□□□□ 0.4
GOLGA6L4A6NEF3 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.54■□□□□ 0.4
GOLGA6L4A6NEF3 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GOLGA6L4A6NEF3 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.54■□□□□ 0.4
GOLGA6L4A6NEF3 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GOLGA6L4A6NEF3 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.54■□□□□ 0.4
GOLGA6L4A6NEF3 AC009093.7-201ENST00000623853 1223 ntBASIC17.54■□□□□ 0.4
GOLGA6L4A6NEF3 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.54■□□□□ 0.4
GOLGA6L4A6NEF3 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.54■□□□□ 0.4
GOLGA6L4A6NEF3 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
GOLGA6L4A6NEF3 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
GOLGA6L4A6NEF3 AC006504.5-208ENST00000588784 2401 ntBASIC17.54■□□□□ 0.4
GOLGA6L4A6NEF3 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GOLGA6L4A6NEF3 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GOLGA6L4A6NEF3 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
GOLGA6L4A6NEF3 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GOLGA6L4A6NEF3 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC17.54■□□□□ 0.4
GOLGA6L4A6NEF3 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.54■□□□□ 0.4
GOLGA6L4A6NEF3 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GOLGA6L4A6NEF3 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
GOLGA6L4A6NEF3 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC17.54■□□□□ 0.4
GOLGA6L4A6NEF3 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GOLGA6L4A6NEF3 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms