Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.37□□□□□ -0.11
AP4S1Q9Y587 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.37□□□□□ -0.11
AP4S1Q9Y587 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
AP4S1Q9Y587 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP4S1Q9Y587 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.37□□□□□ -0.11
AP4S1Q9Y587 FAM215A-202ENST00000632077 792 ntBASIC14.37□□□□□ -0.11
AP4S1Q9Y587 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.37□□□□□ -0.11
AP4S1Q9Y587 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP4S1Q9Y587 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.37□□□□□ -0.11
AP4S1Q9Y587 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP4S1Q9Y587 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.37□□□□□ -0.11
AP4S1Q9Y587 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
AP4S1Q9Y587 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.37□□□□□ -0.11
AP4S1Q9Y587 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP4S1Q9Y587 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.37□□□□□ -0.11
AP4S1Q9Y587 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP4S1Q9Y587 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP4S1Q9Y587 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
AP4S1Q9Y587 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP4S1Q9Y587 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 INE2-201ENST00000630399 1874 ntBASIC14.36□□□□□ -0.11
AP4S1Q9Y587 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 HLA-H-201ENST00000383620 1096 ntBASIC14.36□□□□□ -0.11
AP4S1Q9Y587 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 KRT18P67-201ENST00000432816 1264 ntBASIC14.36□□□□□ -0.11
AP4S1Q9Y587 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
AP4S1Q9Y587 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms