Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 LBH-203ENST00000404397 543 ntTSL 4 BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 RAD18-204ENST00000418463 563 ntTSL 4 BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 RAD18-205ENST00000421052 582 ntTSL 3 BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 AC067863.1-201ENST00000494933 530 ntBASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 SLED1-202ENST00000512051 380 ntBASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 RPL28-205ENST00000558131 444 ntTSL 5 BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 AC010336.2-201ENST00000564226 506 ntBASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 AC005912.2-201ENST00000619492 2400 ntBASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 TREML5P-201ENST00000421694 576 ntBASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 AC092580.3-201ENST00000430932 139 ntBASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 AC097493.3-201ENST00000509725 367 ntBASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms