Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NR1H4Q96RI1 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NR1H4Q96RI1 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NR1H4Q96RI1 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NR1H4Q96RI1 AL691432.1-201ENST00000596308 1422 ntBASIC14.32□□□□□ -0.12
NR1H4Q96RI1 AC011700.1-201ENST00000610409 2627 ntBASIC14.32□□□□□ -0.12
NR1H4Q96RI1 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NR1H4Q96RI1 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.32□□□□□ -0.12
NR1H4Q96RI1 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.32□□□□□ -0.12
NR1H4Q96RI1 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC14.32□□□□□ -0.12
NR1H4Q96RI1 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NR1H4Q96RI1 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NR1H4Q96RI1 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NR1H4Q96RI1 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NR1H4Q96RI1 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NR1H4Q96RI1 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.32□□□□□ -0.12
NR1H4Q96RI1 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NR1H4Q96RI1 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.32□□□□□ -0.12
NR1H4Q96RI1 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
NR1H4Q96RI1 AC084364.1-201ENST00000551967 1556 ntBASIC14.32□□□□□ -0.12
NR1H4Q96RI1 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NR1H4Q96RI1 HCG4P8-203ENST00000443049 980 ntBASIC14.32□□□□□ -0.12
NR1H4Q96RI1 AC106795.1-205ENST00000512851 1056 ntBASIC14.32□□□□□ -0.12
NR1H4Q96RI1 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NR1H4Q96RI1 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NR1H4Q96RI1 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.32□□□□□ -0.12
NR1H4Q96RI1 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NR1H4Q96RI1 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.32□□□□□ -0.12
NR1H4Q96RI1 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NR1H4Q96RI1 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC14.32□□□□□ -0.12
NR1H4Q96RI1 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NR1H4Q96RI1 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NR1H4Q96RI1 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NR1H4Q96RI1 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
NR1H4Q96RI1 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NR1H4Q96RI1 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NR1H4Q96RI1 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NR1H4Q96RI1 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NR1H4Q96RI1 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC14.32□□□□□ -0.12
NR1H4Q96RI1 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NR1H4Q96RI1 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC14.32□□□□□ -0.12
NR1H4Q96RI1 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NR1H4Q96RI1 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
NR1H4Q96RI1 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC14.32□□□□□ -0.12
NR1H4Q96RI1 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC14.32□□□□□ -0.12
NR1H4Q96RI1 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NR1H4Q96RI1 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NR1H4Q96RI1 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NR1H4Q96RI1 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC14.32□□□□□ -0.12
NR1H4Q96RI1 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
NR1H4Q96RI1 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
NR1H4Q96RI1 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.31□□□□□ -0.12
NR1H4Q96RI1 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
NR1H4Q96RI1 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
NR1H4Q96RI1 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC14.31□□□□□ -0.12
NR1H4Q96RI1 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
NR1H4Q96RI1 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NR1H4Q96RI1 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NR1H4Q96RI1 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC14.31□□□□□ -0.12
NR1H4Q96RI1 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
NR1H4Q96RI1 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NR1H4Q96RI1 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NR1H4Q96RI1 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
NR1H4Q96RI1 PCDHB18P-202ENST00000526308 3197 ntBASIC14.31□□□□□ -0.12
NR1H4Q96RI1 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NR1H4Q96RI1 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NR1H4Q96RI1 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NR1H4Q96RI1 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.31□□□□□ -0.12
NR1H4Q96RI1 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC14.31□□□□□ -0.12
NR1H4Q96RI1 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
NR1H4Q96RI1 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.31□□□□□ -0.12
NR1H4Q96RI1 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.31□□□□□ -0.12
NR1H4Q96RI1 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.31□□□□□ -0.12
NR1H4Q96RI1 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.31□□□□□ -0.12
NR1H4Q96RI1 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.31□□□□□ -0.12
NR1H4Q96RI1 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.31□□□□□ -0.12
NR1H4Q96RI1 MIR3909-201ENST00000579518 119 ntBASIC14.31□□□□□ -0.12
NR1H4Q96RI1 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.31□□□□□ -0.12
NR1H4Q96RI1 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NR1H4Q96RI1 AL121772.3-201ENST00000610840 674 ntBASIC14.31□□□□□ -0.12
NR1H4Q96RI1 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.31□□□□□ -0.12
NR1H4Q96RI1 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
NR1H4Q96RI1 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.31□□□□□ -0.12
NR1H4Q96RI1 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC14.31□□□□□ -0.12
NR1H4Q96RI1 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NR1H4Q96RI1 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
NR1H4Q96RI1 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
NR1H4Q96RI1 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NR1H4Q96RI1 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NR1H4Q96RI1 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NR1H4Q96RI1 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
NR1H4Q96RI1 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NR1H4Q96RI1 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
NR1H4Q96RI1 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NR1H4Q96RI1 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
NR1H4Q96RI1 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NR1H4Q96RI1 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NR1H4Q96RI1 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NR1H4Q96RI1 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NR1H4Q96RI1 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms