Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL22A1Q8NFW1 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL22A1Q8NFW1 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL22A1Q8NFW1 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL22A1Q8NFW1 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL22A1Q8NFW1 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC19.46■□□□□ 0.71
COL22A1Q8NFW1 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL22A1Q8NFW1 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL22A1Q8NFW1 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC19.46■□□□□ 0.71
COL22A1Q8NFW1 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
COL22A1Q8NFW1 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL22A1Q8NFW1 HIST1H2APS2-201ENST00000454426 370 ntBASIC19.46■□□□□ 0.71
COL22A1Q8NFW1 AC092896.1-201ENST00000465850 380 ntBASIC19.46■□□□□ 0.71
COL22A1Q8NFW1 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC19.46■□□□□ 0.71
COL22A1Q8NFW1 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC19.46■□□□□ 0.71
COL22A1Q8NFW1 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC19.46■□□□□ 0.71
COL22A1Q8NFW1 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC19.46■□□□□ 0.71
COL22A1Q8NFW1 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
COL22A1Q8NFW1 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL22A1Q8NFW1 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL22A1Q8NFW1 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL22A1Q8NFW1 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.46■□□□□ 0.71
COL22A1Q8NFW1 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
COL22A1Q8NFW1 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC19.45■□□□□ 0.7
COL22A1Q8NFW1 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC19.45■□□□□ 0.7
COL22A1Q8NFW1 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
COL22A1Q8NFW1 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL22A1Q8NFW1 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL22A1Q8NFW1 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL22A1Q8NFW1 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC19.45■□□□□ 0.7
COL22A1Q8NFW1 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC19.45■□□□□ 0.7
COL22A1Q8NFW1 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
COL22A1Q8NFW1 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
COL22A1Q8NFW1 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL22A1Q8NFW1 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.45■□□□□ 0.7
COL22A1Q8NFW1 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL22A1Q8NFW1 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL22A1Q8NFW1 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC19.45■□□□□ 0.7
COL22A1Q8NFW1 AC025186.1-201ENST00000478174 870 ntBASIC19.45■□□□□ 0.7
COL22A1Q8NFW1 AC090136.2-201ENST00000517809 420 ntBASIC19.45■□□□□ 0.7
COL22A1Q8NFW1 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC19.45■□□□□ 0.7
COL22A1Q8NFW1 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC19.45■□□□□ 0.7
COL22A1Q8NFW1 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC19.45■□□□□ 0.7
COL22A1Q8NFW1 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC19.45■□□□□ 0.7
COL22A1Q8NFW1 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL22A1Q8NFW1 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL22A1Q8NFW1 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL22A1Q8NFW1 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL22A1Q8NFW1 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC19.45■□□□□ 0.7
COL22A1Q8NFW1 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL22A1Q8NFW1 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC19.45■□□□□ 0.7
COL22A1Q8NFW1 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC19.44■□□□□ 0.7
COL22A1Q8NFW1 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC19.44■□□□□ 0.7
COL22A1Q8NFW1 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL22A1Q8NFW1 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL22A1Q8NFW1 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
COL22A1Q8NFW1 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL22A1Q8NFW1 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
COL22A1Q8NFW1 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC19.44■□□□□ 0.7
COL22A1Q8NFW1 LINC00265-2P-201ENST00000413372 782 ntBASIC19.44■□□□□ 0.7
COL22A1Q8NFW1 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL22A1Q8NFW1 HINT1-205ENST00000508488 703 ntTSL 2 BASIC19.44■□□□□ 0.7
COL22A1Q8NFW1 VENTXP3-201ENST00000546480 773 ntBASIC19.44■□□□□ 0.7
COL22A1Q8NFW1 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC19.44■□□□□ 0.7
COL22A1Q8NFW1 SNORD3B-1-201ENST00000577988 758 ntBASIC19.44■□□□□ 0.7
COL22A1Q8NFW1 FBXO36P1-201ENST00000579006 471 ntBASIC19.44■□□□□ 0.7
COL22A1Q8NFW1 AL591471.1-201ENST00000621855 229 ntBASIC19.44■□□□□ 0.7
COL22A1Q8NFW1 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL22A1Q8NFW1 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL22A1Q8NFW1 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.44■□□□□ 0.7
COL22A1Q8NFW1 AD000864.1-201ENST00000624076 2295 ntBASIC19.44■□□□□ 0.7
COL22A1Q8NFW1 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC19.44■□□□□ 0.7
COL22A1Q8NFW1 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL22A1Q8NFW1 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
COL22A1Q8NFW1 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
COL22A1Q8NFW1 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
COL22A1Q8NFW1 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL22A1Q8NFW1 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC19.44■□□□□ 0.7
COL22A1Q8NFW1 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL22A1Q8NFW1 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC19.44■□□□□ 0.7
COL22A1Q8NFW1 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC19.44■□□□□ 0.7
COL22A1Q8NFW1 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL22A1Q8NFW1 RN7SL288P-201ENST00000490496 291 ntBASIC19.43■□□□□ 0.7
COL22A1Q8NFW1 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC19.43■□□□□ 0.7
COL22A1Q8NFW1 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC19.43■□□□□ 0.7
COL22A1Q8NFW1 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL22A1Q8NFW1 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL22A1Q8NFW1 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL22A1Q8NFW1 WASH7P-201ENST00000488147 1351 ntBASIC19.43■□□□□ 0.7
COL22A1Q8NFW1 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC19.43■□□□□ 0.7
COL22A1Q8NFW1 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC19.43■□□□□ 0.7
COL22A1Q8NFW1 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC19.43■□□□□ 0.7
COL22A1Q8NFW1 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC19.43■□□□□ 0.7
COL22A1Q8NFW1 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL22A1Q8NFW1 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL22A1Q8NFW1 SUPT20HL2-201ENST00000486479 2409 ntBASIC19.43■□□□□ 0.7
COL22A1Q8NFW1 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL22A1Q8NFW1 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC19.43■□□□□ 0.7
COL22A1Q8NFW1 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL22A1Q8NFW1 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms