Protein–RNA interactions for Protein: Q8IXR9

C12orf56, Uncharacterized protein C12orf56, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56Q8IXR9 KRT43P-201ENST00000434019 910 ntBASIC16.34■□□□□ 0.21
C12orf56Q8IXR9 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
C12orf56Q8IXR9 AP000812.2-201ENST00000538934 718 ntBASIC16.34■□□□□ 0.21
C12orf56Q8IXR9 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.34■□□□□ 0.21
C12orf56Q8IXR9 ECM1P1-201ENST00000604092 1279 ntBASIC16.34■□□□□ 0.21
C12orf56Q8IXR9 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.34■□□□□ 0.21
C12orf56Q8IXR9 AC244669.2-201ENST00000612320 853 ntBASIC16.34■□□□□ 0.21
C12orf56Q8IXR9 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.34■□□□□ 0.21
C12orf56Q8IXR9 AC006453.4-201ENST00000636949 1252 ntBASIC16.34■□□□□ 0.21
C12orf56Q8IXR9 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.34■□□□□ 0.21
C12orf56Q8IXR9 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
C12orf56Q8IXR9 AL354702.1-201ENST00000442006 1960 ntBASIC16.34■□□□□ 0.21
C12orf56Q8IXR9 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
C12orf56Q8IXR9 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
C12orf56Q8IXR9 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
C12orf56Q8IXR9 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
C12orf56Q8IXR9 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
C12orf56Q8IXR9 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
C12orf56Q8IXR9 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.34■□□□□ 0.21
C12orf56Q8IXR9 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
C12orf56Q8IXR9 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
C12orf56Q8IXR9 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
C12orf56Q8IXR9 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
C12orf56Q8IXR9 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
C12orf56Q8IXR9 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.34■□□□□ 0.21
C12orf56Q8IXR9 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
C12orf56Q8IXR9 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
C12orf56Q8IXR9 LINC00552-201ENST00000625151 2579 ntBASIC16.33■□□□□ 0.21
C12orf56Q8IXR9 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
C12orf56Q8IXR9 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.33■□□□□ 0.21
C12orf56Q8IXR9 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
C12orf56Q8IXR9 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
C12orf56Q8IXR9 LINC02228-204ENST00000642115 2962 ntBASIC16.33■□□□□ 0.21
C12orf56Q8IXR9 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.33■□□□□ 0.21
C12orf56Q8IXR9 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC16.33■□□□□ 0.21
C12orf56Q8IXR9 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.33■□□□□ 0.21
C12orf56Q8IXR9 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
C12orf56Q8IXR9 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
C12orf56Q8IXR9 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
C12orf56Q8IXR9 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.33■□□□□ 0.2
C12orf56Q8IXR9 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.33■□□□□ 0.2
C12orf56Q8IXR9 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
C12orf56Q8IXR9 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.33■□□□□ 0.2
C12orf56Q8IXR9 AC006001.1-201ENST00000325130 474 ntBASIC16.33■□□□□ 0.2
C12orf56Q8IXR9 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
C12orf56Q8IXR9 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.33■□□□□ 0.2
C12orf56Q8IXR9 RN7SKP175-201ENST00000408472 289 ntBASIC16.33■□□□□ 0.2
C12orf56Q8IXR9 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
C12orf56Q8IXR9 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.33■□□□□ 0.2
C12orf56Q8IXR9 FAM197Y7-201ENST00000432892 766 ntBASIC16.33■□□□□ 0.2
C12orf56Q8IXR9 TPT1P11-201ENST00000458482 498 ntBASIC16.33■□□□□ 0.2
C12orf56Q8IXR9 AL391280.1-201ENST00000506969 1062 ntBASIC16.33■□□□□ 0.2
C12orf56Q8IXR9 AP003171.2-201ENST00000528208 925 ntBASIC16.33■□□□□ 0.2
C12orf56Q8IXR9 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.33■□□□□ 0.2
C12orf56Q8IXR9 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.33■□□□□ 0.2
C12orf56Q8IXR9 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.33■□□□□ 0.2
C12orf56Q8IXR9 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.33■□□□□ 0.2
C12orf56Q8IXR9 BX088702.1-201ENST00000610784 235 ntBASIC16.33■□□□□ 0.2
C12orf56Q8IXR9 AL162274.1-201ENST00000617191 1098 ntBASIC16.33■□□□□ 0.2
C12orf56Q8IXR9 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
C12orf56Q8IXR9 FKBP4P6-201ENST00000457486 1332 ntBASIC16.33■□□□□ 0.2
C12orf56Q8IXR9 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.33■□□□□ 0.2
C12orf56Q8IXR9 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.33■□□□□ 0.2
C12orf56Q8IXR9 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
C12orf56Q8IXR9 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
C12orf56Q8IXR9 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
C12orf56Q8IXR9 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
C12orf56Q8IXR9 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.33■□□□□ 0.2
C12orf56Q8IXR9 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.33■□□□□ 0.2
C12orf56Q8IXR9 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
C12orf56Q8IXR9 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
C12orf56Q8IXR9 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
C12orf56Q8IXR9 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
C12orf56Q8IXR9 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
C12orf56Q8IXR9 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
C12orf56Q8IXR9 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
C12orf56Q8IXR9 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
C12orf56Q8IXR9 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C12orf56Q8IXR9 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.32■□□□□ 0.2
C12orf56Q8IXR9 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
C12orf56Q8IXR9 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.32■□□□□ 0.2
C12orf56Q8IXR9 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C12orf56Q8IXR9 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.32■□□□□ 0.2
C12orf56Q8IXR9 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C12orf56Q8IXR9 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C12orf56Q8IXR9 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
C12orf56Q8IXR9 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
C12orf56Q8IXR9 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.32■□□□□ 0.2
C12orf56Q8IXR9 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
C12orf56Q8IXR9 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C12orf56Q8IXR9 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
C12orf56Q8IXR9 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C12orf56Q8IXR9 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.32■□□□□ 0.2
C12orf56Q8IXR9 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C12orf56Q8IXR9 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
C12orf56Q8IXR9 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.32■□□□□ 0.2
C12orf56Q8IXR9 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
C12orf56Q8IXR9 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C12orf56Q8IXR9 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC16.32■□□□□ 0.2
C12orf56Q8IXR9 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms