Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 AC092135.3-201ENST00000624151 1846 ntBASIC12.13□□□□□ -0.47
FAM78BQ5VT40 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 AC027612.1-201ENST00000445234 2395 ntBASIC12.13□□□□□ -0.47
FAM78BQ5VT40 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 MIR574-201ENST00000385209 96 ntBASIC12.12□□□□□ -0.47
FAM78BQ5VT40 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 FAM58CP-201ENST00000435741 640 ntBASIC12.12□□□□□ -0.47
FAM78BQ5VT40 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 COX5A-206ENST00000568783 571 ntTSL 3 BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 AC027307.2-201ENST00000591252 911 ntBASIC12.12□□□□□ -0.47
FAM78BQ5VT40 NKG7-205ENST00000600427 520 ntTSL 3 BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 AC089987.1-201ENST00000551654 2209 ntBASIC12.12□□□□□ -0.47
FAM78BQ5VT40 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
FAM78BQ5VT40 AC018529.2-202ENST00000611482 3087 ntBASIC12.12□□□□□ -0.47
FAM78BQ5VT40 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 AC113367.3-201ENST00000508316 1912 ntBASIC12.11□□□□□ -0.47
FAM78BQ5VT40 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
FAM78BQ5VT40 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms