Protein–RNA interactions for Protein: Q587I9

SFT2D3, Vesicle transport protein SFT2C, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D3Q587I9 MTHFR-210ENST00000641407 2387 ntBASIC14.9□□□□□ -0.02
SFT2D3Q587I9 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.9□□□□□ -0.02
SFT2D3Q587I9 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.9□□□□□ -0.02
SFT2D3Q587I9 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SFT2D3Q587I9 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SFT2D3Q587I9 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SFT2D3Q587I9 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
SFT2D3Q587I9 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.9□□□□□ -0.02
SFT2D3Q587I9 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.9□□□□□ -0.02
SFT2D3Q587I9 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SFT2D3Q587I9 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.9□□□□□ -0.02
SFT2D3Q587I9 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 COX20P2-201ENST00000452636 358 ntBASIC14.89□□□□□ -0.03
SFT2D3Q587I9 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 SPDYE18-201ENST00000510091 1050 ntBASIC14.89□□□□□ -0.03
SFT2D3Q587I9 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 AC074044.1-201ENST00000609673 707 ntBASIC14.89□□□□□ -0.03
SFT2D3Q587I9 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.89□□□□□ -0.03
SFT2D3Q587I9 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SFT2D3Q587I9 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SFT2D3Q587I9 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SFT2D3Q587I9 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SFT2D3Q587I9 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SFT2D3Q587I9 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SFT2D3Q587I9 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SFT2D3Q587I9 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SFT2D3Q587I9 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SFT2D3Q587I9 AP001267.2-201ENST00000532619 2086 ntBASIC14.88□□□□□ -0.03
SFT2D3Q587I9 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SFT2D3Q587I9 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SFT2D3Q587I9 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SFT2D3Q587I9 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
SFT2D3Q587I9 AL356585.2-201ENST00000625078 2396 ntBASIC14.88□□□□□ -0.03
SFT2D3Q587I9 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SFT2D3Q587I9 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.88□□□□□ -0.03
SFT2D3Q587I9 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
SFT2D3Q587I9 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.88□□□□□ -0.03
SFT2D3Q587I9 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SFT2D3Q587I9 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SFT2D3Q587I9 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SFT2D3Q587I9 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SFT2D3Q587I9 PIN1P1-201ENST00000412108 996 ntBASIC14.88□□□□□ -0.03
SFT2D3Q587I9 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.88□□□□□ -0.03
SFT2D3Q587I9 GNAQP1-201ENST00000444815 1067 ntBASIC14.88□□□□□ -0.03
SFT2D3Q587I9 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.88□□□□□ -0.03
SFT2D3Q587I9 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SFT2D3Q587I9 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.88□□□□□ -0.03
SFT2D3Q587I9 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.88□□□□□ -0.03
SFT2D3Q587I9 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.88□□□□□ -0.03
SFT2D3Q587I9 DOC2GP-202ENST00000514950 1163 ntBASIC14.88□□□□□ -0.03
SFT2D3Q587I9 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.88□□□□□ -0.03
SFT2D3Q587I9 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.88□□□□□ -0.03
SFT2D3Q587I9 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.88□□□□□ -0.03
SFT2D3Q587I9 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms