Protein–RNA interactions for Protein: Q3C1V8

BSX, Brain-specific homeobox protein homolog, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BSXQ3C1V8 AL627223.1-201ENST00000416693 442 ntBASIC12.32□□□□□ -0.44
BSXQ3C1V8 AC074338.1-201ENST00000416825 156 ntBASIC12.32□□□□□ -0.44
BSXQ3C1V8 KRT18P32-201ENST00000424695 1287 ntBASIC12.32□□□□□ -0.44
BSXQ3C1V8 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC12.32□□□□□ -0.44
BSXQ3C1V8 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC12.32□□□□□ -0.44
BSXQ3C1V8 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC12.32□□□□□ -0.44
BSXQ3C1V8 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
BSXQ3C1V8 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC12.32□□□□□ -0.44
BSXQ3C1V8 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC12.32□□□□□ -0.44
BSXQ3C1V8 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC12.32□□□□□ -0.44
BSXQ3C1V8 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC12.32□□□□□ -0.44
BSXQ3C1V8 AC093520.2-201ENST00000561830 333 ntBASIC12.32□□□□□ -0.44
BSXQ3C1V8 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC12.32□□□□□ -0.44
BSXQ3C1V8 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
BSXQ3C1V8 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.32□□□□□ -0.44
BSXQ3C1V8 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
BSXQ3C1V8 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
BSXQ3C1V8 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
BSXQ3C1V8 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
BSXQ3C1V8 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
BSXQ3C1V8 AP000845.1-201ENST00000581677 2131 ntBASIC12.32□□□□□ -0.44
BSXQ3C1V8 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
BSXQ3C1V8 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
BSXQ3C1V8 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
BSXQ3C1V8 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
BSXQ3C1V8 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
BSXQ3C1V8 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.32□□□□□ -0.44
BSXQ3C1V8 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC12.32□□□□□ -0.44
BSXQ3C1V8 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
BSXQ3C1V8 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.32□□□□□ -0.44
BSXQ3C1V8 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.32□□□□□ -0.44
BSXQ3C1V8 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
BSXQ3C1V8 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
BSXQ3C1V8 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
BSXQ3C1V8 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BSXQ3C1V8 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BSXQ3C1V8 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
BSXQ3C1V8 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
BSXQ3C1V8 AL031595.1-201ENST00000623969 4709 ntBASIC12.31□□□□□ -0.44
BSXQ3C1V8 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
BSXQ3C1V8 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.31□□□□□ -0.44
BSXQ3C1V8 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.31□□□□□ -0.44
BSXQ3C1V8 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.31□□□□□ -0.44
BSXQ3C1V8 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
BSXQ3C1V8 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.31□□□□□ -0.44
BSXQ3C1V8 DMBT1P1-203ENST00000636837 4628 ntBASIC12.31□□□□□ -0.44
BSXQ3C1V8 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
BSXQ3C1V8 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.31□□□□□ -0.44
BSXQ3C1V8 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
BSXQ3C1V8 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
BSXQ3C1V8 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BSXQ3C1V8 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BSXQ3C1V8 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.31□□□□□ -0.44
BSXQ3C1V8 Z97205.2-201ENST00000564697 1639 ntBASIC12.31□□□□□ -0.44
BSXQ3C1V8 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BSXQ3C1V8 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BSXQ3C1V8 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
BSXQ3C1V8 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC12.31□□□□□ -0.44
BSXQ3C1V8 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC12.31□□□□□ -0.44
BSXQ3C1V8 AC005237.2-201ENST00000434368 219 ntBASIC12.31□□□□□ -0.44
BSXQ3C1V8 SPDYE14P-201ENST00000442619 822 ntBASIC12.31□□□□□ -0.44
BSXQ3C1V8 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.31□□□□□ -0.44
BSXQ3C1V8 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC12.31□□□□□ -0.44
BSXQ3C1V8 YBX1P5-201ENST00000509441 847 ntBASIC12.31□□□□□ -0.44
BSXQ3C1V8 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.31□□□□□ -0.44
BSXQ3C1V8 SLED1-202ENST00000512051 380 ntBASIC12.31□□□□□ -0.44
BSXQ3C1V8 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC12.31□□□□□ -0.44
BSXQ3C1V8 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC12.31□□□□□ -0.44
BSXQ3C1V8 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
BSXQ3C1V8 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC12.31□□□□□ -0.44
BSXQ3C1V8 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC12.31□□□□□ -0.44
BSXQ3C1V8 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.31□□□□□ -0.44
BSXQ3C1V8 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BSXQ3C1V8 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BSXQ3C1V8 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
BSXQ3C1V8 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BSXQ3C1V8 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BSXQ3C1V8 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BSXQ3C1V8 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.31□□□□□ -0.44
BSXQ3C1V8 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
BSXQ3C1V8 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
BSXQ3C1V8 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.31□□□□□ -0.44
BSXQ3C1V8 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.31□□□□□ -0.44
BSXQ3C1V8 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC12.31□□□□□ -0.44
BSXQ3C1V8 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BSXQ3C1V8 AL023775.1-201ENST00000454907 1746 ntBASIC12.31□□□□□ -0.44
BSXQ3C1V8 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BSXQ3C1V8 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
BSXQ3C1V8 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BSXQ3C1V8 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BSXQ3C1V8 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BSXQ3C1V8 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
BSXQ3C1V8 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
BSXQ3C1V8 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
BSXQ3C1V8 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
BSXQ3C1V8 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.3□□□□□ -0.44
BSXQ3C1V8 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
BSXQ3C1V8 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
BSXQ3C1V8 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
BSXQ3C1V8 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms