Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFX7Q2KHR2 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFX7Q2KHR2 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RFX7Q2KHR2 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFX7Q2KHR2 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFX7Q2KHR2 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RFX7Q2KHR2 TISP43-201ENST00000409793 538 ntTSL 4 BASIC18.15■□□□□ 0.5
RFX7Q2KHR2 AC079178.1-201ENST00000420915 656 ntBASIC18.15■□□□□ 0.5
RFX7Q2KHR2 RGS5-214ENST00000429865 754 ntTSL 3 BASIC18.15■□□□□ 0.5
RFX7Q2KHR2 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFX7Q2KHR2 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFX7Q2KHR2 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC18.15■□□□□ 0.5
RFX7Q2KHR2 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC18.15■□□□□ 0.5
RFX7Q2KHR2 RN7SL713P-201ENST00000582127 302 ntBASIC18.15■□□□□ 0.5
RFX7Q2KHR2 AL022328.3-201ENST00000607943 679 ntBASIC18.15■□□□□ 0.5
RFX7Q2KHR2 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC18.15■□□□□ 0.5
RFX7Q2KHR2 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFX7Q2KHR2 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFX7Q2KHR2 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RFX7Q2KHR2 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
RFX7Q2KHR2 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RFX7Q2KHR2 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFX7Q2KHR2 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC18.14■□□□□ 0.49
RFX7Q2KHR2 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC18.14■□□□□ 0.49
RFX7Q2KHR2 MPI-203ENST00000535694 1523 ntTSL 2 BASIC18.14■□□□□ 0.49
RFX7Q2KHR2 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFX7Q2KHR2 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RFX7Q2KHR2 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFX7Q2KHR2 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFX7Q2KHR2 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFX7Q2KHR2 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RFX7Q2KHR2 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RFX7Q2KHR2 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFX7Q2KHR2 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFX7Q2KHR2 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFX7Q2KHR2 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFX7Q2KHR2 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
RFX7Q2KHR2 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC18.14■□□□□ 0.49
RFX7Q2KHR2 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC18.14■□□□□ 0.49
RFX7Q2KHR2 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC18.14■□□□□ 0.49
RFX7Q2KHR2 CALR4P-201ENST00000431943 946 ntBASIC18.14■□□□□ 0.49
RFX7Q2KHR2 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC18.14■□□□□ 0.49
RFX7Q2KHR2 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RFX7Q2KHR2 TPI1-206ENST00000488464 791 ntTSL 5 BASIC18.14■□□□□ 0.49
RFX7Q2KHR2 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RFX7Q2KHR2 AL391280.1-201ENST00000506969 1062 ntBASIC18.14■□□□□ 0.49
RFX7Q2KHR2 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
RFX7Q2KHR2 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RFX7Q2KHR2 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC18.14■□□□□ 0.49
RFX7Q2KHR2 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC18.14■□□□□ 0.49
RFX7Q2KHR2 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RFX7Q2KHR2 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC18.14■□□□□ 0.49
RFX7Q2KHR2 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
RFX7Q2KHR2 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC18.14■□□□□ 0.49
RFX7Q2KHR2 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RFX7Q2KHR2 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFX7Q2KHR2 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
RFX7Q2KHR2 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFX7Q2KHR2 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFX7Q2KHR2 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RFX7Q2KHR2 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC18.13■□□□□ 0.49
RFX7Q2KHR2 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RFX7Q2KHR2 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFX7Q2KHR2 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RFX7Q2KHR2 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RFX7Q2KHR2 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC18.13■□□□□ 0.49
RFX7Q2KHR2 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC18.13■□□□□ 0.49
RFX7Q2KHR2 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RFX7Q2KHR2 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC18.13■□□□□ 0.49
RFX7Q2KHR2 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFX7Q2KHR2 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
RFX7Q2KHR2 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RFX7Q2KHR2 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFX7Q2KHR2 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFX7Q2KHR2 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
RFX7Q2KHR2 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RFX7Q2KHR2 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC18.13■□□□□ 0.49
RFX7Q2KHR2 FAM8A4P-201ENST00000435433 1213 ntBASIC18.13■□□□□ 0.49
RFX7Q2KHR2 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC18.13■□□□□ 0.49
RFX7Q2KHR2 RNF41-210ENST00000552244 716 ntTSL 3 BASIC18.13■□□□□ 0.49
RFX7Q2KHR2 PPY2P-201ENST00000582808 702 ntBASIC18.13■□□□□ 0.49
RFX7Q2KHR2 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RFX7Q2KHR2 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RFX7Q2KHR2 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RFX7Q2KHR2 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFX7Q2KHR2 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFX7Q2KHR2 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RFX7Q2KHR2 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC18.12■□□□□ 0.49
RFX7Q2KHR2 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RFX7Q2KHR2 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RFX7Q2KHR2 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC18.12■□□□□ 0.49
RFX7Q2KHR2 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RFX7Q2KHR2 AP000593.2-201ENST00000542775 1433 ntBASIC18.12■□□□□ 0.49
RFX7Q2KHR2 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFX7Q2KHR2 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RFX7Q2KHR2 AC007292.2-201ENST00000593524 1812 ntBASIC18.12■□□□□ 0.49
RFX7Q2KHR2 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFX7Q2KHR2 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
RFX7Q2KHR2 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC18.12■□□□□ 0.49
RFX7Q2KHR2 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms