Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NPIPA2E9PIF3 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NPIPA2E9PIF3 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NPIPA2E9PIF3 AC148477.4-201ENST00000613430 1793 ntBASIC13.85□□□□□ -0.19
NPIPA2E9PIF3 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
NPIPA2E9PIF3 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
NPIPA2E9PIF3 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NPIPA2E9PIF3 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
NPIPA2E9PIF3 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
NPIPA2E9PIF3 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.85□□□□□ -0.19
NPIPA2E9PIF3 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 AC112693.3-201ENST00000624819 1983 ntBASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 CNN2P8-201ENST00000421872 913 ntBASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 AC023310.1-201ENST00000554836 735 ntBASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 AC009542.2-202ENST00000619004 1067 ntBASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 AC138951.2-201ENST00000623455 1161 ntBASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 AP002414.2-201ENST00000591780 3365 ntBASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA2E9PIF3 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.83□□□□□ -0.19
NPIPA2E9PIF3 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
NPIPA2E9PIF3 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
NPIPA2E9PIF3 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.83□□□□□ -0.19
NPIPA2E9PIF3 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
NPIPA2E9PIF3 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
NPIPA2E9PIF3 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.19
NPIPA2E9PIF3 AC138035.3-201ENST00000622706 2791 ntBASIC13.83□□□□□ -0.19
NPIPA2E9PIF3 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
NPIPA2E9PIF3 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.83□□□□□ -0.19
NPIPA2E9PIF3 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
NPIPA2E9PIF3 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.19
NPIPA2E9PIF3 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA2E9PIF3 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.83□□□□□ -0.2
NPIPA2E9PIF3 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA2E9PIF3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA2E9PIF3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
NPIPA2E9PIF3 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.83□□□□□ -0.2
NPIPA2E9PIF3 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.83□□□□□ -0.2
NPIPA2E9PIF3 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA2E9PIF3 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA2E9PIF3 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA2E9PIF3 RNU1-114P-201ENST00000365297 166 ntBASIC13.83□□□□□ -0.2
NPIPA2E9PIF3 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.83□□□□□ -0.2
NPIPA2E9PIF3 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA2E9PIF3 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.83□□□□□ -0.2
NPIPA2E9PIF3 KLF2P2-201ENST00000416807 1039 ntBASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms